aryeelab / hichipper

A preprocessing and QC pipeline for HiChIP data
MIT License
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permissions associated with making QC report #5

Closed caleblareau closed 7 years ago

caleblareau commented 7 years ago

trying to render the QC report (.rmd file a la rmarkdown::render) throws an error for writing permissions in v0.3.1 due to trying to access the output directory through the root.

Discussion here: https://github.com/rstudio/rmarkdown/issues/587

caleblareau commented 7 years ago

Fixed via version 0.4.2 ish where we copy the QC report script from the bin and run it locally