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arzwa / wgd

Python package and CLI for whole-genome duplication related analyses. This package is deprecated in favor of https://github.com/heche-psb/wgd.
http://wgd.readthedocs.io/en/latest/
GNU General Public License v3.0
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wgd ksd error #27

Closed liufuyan2016 closed 4 years ago

liufuyan2016 commented 4 years ago

Dear, When I use wgd ksd, the error is occurred at last:

/Python/3.5.2/lib/pythwgd ksd erroron3.5/site-packages/joblib/externals/loky/process_executor.py:706: UserWarning: A worker stopped while some jobs were given to the executor. This can be caused by a too short worker timeout or by a memory leak

Could you help me check this issues? Thank you!

arzwa commented 4 years ago

Hi, sorry for the late reply! I haven't seen this issue before and from what I can find on the web it seems to be related to numpy and/or joblib. I wonder though, does this warning make the program crash? Normally if its a warning its shouldn't be an error? Do you get output files?

arzwa commented 4 years ago

closing due to inactivity