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arzwa / wgd

Python package and CLI for whole-genome duplication related analyses. This package is deprecated in favor of https://github.com/heche-psb/wgd.
http://wgd.readthedocs.io/en/latest/
GNU General Public License v3.0
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noninteractive apt-get #6

Closed mercanca closed 5 years ago

mercanca commented 5 years ago

There is an issue at wgd.shub. tzdata packet ask timezone interactively, but we can't answer this question. Because of that reason, the apt-get line should be modified like below to work: 

apt-get update && DEBIAN_FRONTEND=noninteractive apt-get -yq install python3-pip python3-tk git wget \
        build-essential mcl ncbi-blast+ muscle mafft prank fasttree phyml paml
arzwa commented 5 years ago

Thanks a lot! I have updated the wgd.shub file as you suggested.