issues
search
asapdiscovery
/
choppa
Integrated mutational and structural biology data into a concerted HTML view.
MIT License
1
stars
0
forks
source link
issues
Newest
Newest
Most commented
Recently updated
Oldest
Least commented
Least recently updated
Add docs for nextstrain CLI and pipeline
#47
hmacdope
opened
2 days ago
0
Correctly align fitness data to the PDB structure
#46
hmacdope
opened
2 days ago
0
Remove reporting and scoring
#45
hmacdope
closed
2 days ago
0
FIx test failures and CI
#44
hmacdope
closed
3 days ago
0
[DNM] prelim fixes on ns2b3 misalignment
#43
JenkeScheen
opened
2 months ago
0
Add Nextstrain functionality
#42
JenkeScheen
closed
2 days ago
1
Fix tests, add cli tests and fix some broken cli elements
#41
hmacdope
closed
2 months ago
0
conda-forge installation doesn't work
#40
mariacm12
closed
2 months ago
0
add nextstrain functionality
#39
JenkeScheen
closed
2 days ago
1
default column parsing
#38
JenkeScheen
opened
3 months ago
0
Reporting and Scoring.
#37
hmacdope
closed
2 days ago
1
Possibly remove choppa/IO/convert.py
#36
hmacdope
opened
3 months ago
0
Add contributing guidelines
#35
hmacdope
opened
3 months ago
0
integration tests for all public ASAP targets
#34
JenkeScheen
opened
3 months ago
0
make API documentation more detailed
#33
JenkeScheen
opened
3 months ago
0
fix ns2b3 fitness view generation
#32
JenkeScheen
opened
3 months ago
0
Add integration tests for targets we work on
#31
hmacdope
closed
2 days ago
1
Fix docs
#30
hmacdope
closed
4 months ago
0
Doc setup and autodoc not working
#29
hmacdope
closed
4 months ago
0
Make conda installable
#28
hmacdope
closed
2 months ago
1
Documentation + tutorials
#27
hmacdope
closed
3 months ago
0
Edit zenodo release number
#26
hmacdope
closed
4 months ago
1
Fix wt issue
#25
JenkeScheen
closed
4 months ago
0
show bond orders in ligand view
#24
JenkeScheen
closed
3 months ago
1
[critical] wildtype detection is wrong in HTML view
#23
JenkeScheen
closed
4 months ago
0
Update README.md
#22
JenkeScheen
closed
4 months ago
0
proper removal of solvent in utils
#21
JenkeScheen
opened
5 months ago
0
add first documentation draft
#20
JenkeScheen
closed
5 months ago
0
Flatten api structure
#19
JenkeScheen
closed
5 months ago
0
deal with phylo data more elegantly
#18
JenkeScheen
opened
5 months ago
0
Remove tempfile usage in string writing
#17
hmacdope
closed
5 months ago
0
first tests
#16
JenkeScheen
closed
5 months ago
3
Fix progressbar
#15
hmacdope
opened
5 months ago
0
CLI QOL improvements
#14
JenkeScheen
closed
5 months ago
0
Jinja rendering
#13
hmacdope
closed
5 months ago
1
Use Jinja2 templating to render HTML
#12
hmacdope
closed
5 months ago
0
Add CI
#11
hmacdope
closed
5 months ago
0
Add multiprocessing to logoplot generation
#10
hmacdope
closed
5 months ago
0
Current env is `noarch` compatible, rename
#9
hmacdope
closed
5 months ago
0
HBA / HBD selection fragile, should use elements
#8
hmacdope
closed
5 months ago
3
Add basic documentation
#7
hmacdope
closed
4 months ago
1
Remove cruft and improve gitignore
#6
hmacdope
closed
5 months ago
1
Add basic tests and CI
#5
hmacdope
closed
5 months ago
0
Flatten module structure
#4
hmacdope
closed
5 months ago
1
Avoid class names that shadow common or previously used namess
#3
hmacdope
closed
5 months ago
1
need to multiprocess logoplot generation
#2
JenkeScheen
closed
5 months ago
0
In memory attachment points
#1
hmacdope
closed
3 months ago
0