aschuerch / MolecularEpidemiology_AnalysisWGS

https://aschuerch.github.io/MolecularEpidemiology_AnalysisWGS/
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Update 12-pangenome-analysis.md #9

Closed aldertzomer closed 5 years ago

aldertzomer commented 5 years ago

Add the -r flag to roary to generate plots of the pan and core genome (Rplots.pdf) to investigate if M. tuberculosis has an open or closed pangenome.