conda install issue - Githubissues

asdcid / Genome_Assembly_Assessment

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conda install issue #2

Open Karimi-81 opened 3 years ago

Karimi-81 commented 3 years ago

Hi there, I am trying install the asdcid but I faced with the following issue related to conda env: (base) -bash-4.2$ conda env create -f environment.yml Collecting package metadata (repodata.json): done Solving environment: failed

ResolvePackageNotFound:

genometools-genometools==1.5.10=h470a237_1

Do you have any idea to solve the problem. In addition, genometools is available on our server and I can load genometools using module load genometools but I am not sure if it can help.

asdcid commented 3 years ago

Hi Karimi,

I have no idea how this happened. genometools is for LAI package. If you can correctly install LAI, that is fine.

In addition, you can also install all packages this pipeline needed manually (see Install in Readme.)

Cheers, R