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ashander / ftprime

Forward-time simulation of the msprime data structure (for development)
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Add recombination map to initial ts in examples #49

Open ashander opened 6 years ago

ashander commented 6 years ago

raised in #48

hyanwong commented 6 years ago

Also (importantly) need to add Ne

ashander commented 6 years ago

👍

On Thu, Nov 2, 2017 at 2:35 PM, Yan Wong notifications@github.com wrote:

Also (importantly) need to add Ne

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hyanwong commented 6 years ago

E.g. 

rcmb_map = msprime.RecombinationMap.uniform_map(length, recomb_rate, length)
init_ts = msprime.simulate(2*len(first_gen), Ne=popsize, recombination_map=rcmb_map)