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asntech / intervene

Intervene: a tool for intersection and visualization of multiple genomic region and gene sets
http://intervene.rtfd.io/
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Error running intervene upset method #30

Closed camilogarciabotero closed 3 years ago

camilogarciabotero commented 4 years ago

Hi all,

Intervene is such a good program. Thank you letting it as open source.

On the other hand I was trying to run intervene upset -i /*gff and got the following massages:

Screen Shot 2020-02-27 at 10 21 11 AM

So, I was wondering if you can give some lights to solve this issue. By the way, I installed intervene via conda

Cheers, Camilo

asntech commented 4 years ago

Sorry for the late response. Technically, it should install the UpSetR package. Did you try to install the UpSetR manually? Try this: conda install -c bioconda r-upsetr

camilogarciabotero commented 4 years ago

Hi @asntech,

Yes. I did it and it worked great. Thank for the response. It could help others anyway!

Cheers.