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asoltis / MutEnricher

Somatic coding and non-coding mutation enrichment analysis for tumor WGS data
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Installation, where is the math_funcs directory? #6

Closed Samir-A closed 1 year ago

Samir-A commented 1 year ago

Hello,

I'd first like to say this tool is very well documented and it is perfect for what I need it to do. The only problem I'm having trouble installing in... I am on the Cythonize math functions code step and I am having trouble finding the math_funcs directory. I assume it is a subdirectory in the library package Cython but I cannot find it.

Is it possible I can get helped out?

Thanks

asoltis commented 1 year ago

Hello,

Thank you for trying out the code. If you clone the package to your computer with git or if you download the package as a zip (code tab, code drop-down, "Download ZIP"; or via the releases here) you should see a sub-directory called "math_funcs" containing the code you need. You would then need to enter this folder and run the setup command (i.e. python setup.py build_ext --inplace).

Samir-A commented 1 year ago

Thanks for the help I was able to install the tool!