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asrivathsan / ONTbarcoder

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SyntaxError: invalid syntax #1

Closed Enorya closed 3 years ago

Enorya commented 3 years ago

Hi @asrivathsan, I'm trying to use ONTbarcoder in order to demultiplex my reads sequenced with MinION sequencer but I have one problem. I cloned your github repository and I tried to launch ONTbarcoder with this command: python ONTbarcoder.py and I get this error: 

    print os.path.join(self.outdir,"identicalbarcodes_658chosen.fa")
           ^
SyntaxError: invalid syntax

I'm working on a linux system with ubuntu 16.04 Do you have any idea what is the problem? Am I doing something wrong?

asrivathsan commented 3 years ago

Hello,

I believe this is happening because the software is being run as a script. It has been packaged as executable with GUI for linux as well; available in the releases tab in this repository: https://github.com/asrivathsan/ONTbarcoder/releases . You can double click the ONTbarcoder executable from the downloaded package for your OS.

Best wishes Amrita

Enorya commented 3 years ago

It works, thanks!