search

assemblerflow / flowcraft

FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. :whale::package:
GNU General Public License v3.0
241 stars 44 forks source link

Added hisat2 component #212

Closed PhilPalmer closed 5 years ago

codecov-io commented 5 years ago

Codecov Report

Merging #212 into master will increase coverage by 2.09%. The diff coverage is 100%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #212      +/-   ##
==========================================
+ Coverage   41.95%   44.04%   +2.09%     
==========================================
  Files          72       67       -5     
  Lines        6461     6050     -411     
==========================================
- Hits         2711     2665      -46     
+ Misses       3750     3385     -365
Impacted Files Coverage Δ
flowcraft/generator/components/mapping.py 100% <100%> (ø) :arrow_up:
flowcraft/templates/process_newick.py 0% <0%> (ø) :arrow_up:
flowcraft/generator/recipes/denim.py 100% <0%> (ø) :arrow_up:
flowcraft/templates/split_fasta.py 0% <0%> (ø) :arrow_up:
flowcraft/generator/components/metagenomics.py 100% <0%> (ø) :arrow_up:
flowcraft/generator/components/typing.py 100% <0%> (ø) :arrow_up:
flowcraft/generator/components/phylogeny.py 100% <0%> (ø) :arrow_up:
flowcraft/templates/dengue_typing_assembly.py
flowcraft/templates/dengue_typing_reads.py
... and 5 more

Continue to review full report at Codecov.

Legend - Click here to learn more Δ = absolute <relative> (impact), ø = not affected, ? = missing data Powered by Codecov. Last update d6c6a3c...80d145b. Read the comment docs.