search

astroconda / astroconda-contrib

Community Submitted Conda Recipes
12 stars 38 forks source link

synphot iraf crash, linux mint #259

Closed qssha closed 7 years ago

qssha commented 7 years ago

iraf and all packages intalled from astroconda, downloaded all synphot-data files, $PYSYN_CDBS path added in bash_profile and crrefer in login.cl iraf and pyraf works fine, but calcphot always crashes. Example

synphot> calcphot "band(wfpc,f555w)" "rn(bb(5000),band(v),18.6,vegamag)" counts

Error in `/home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e': free(): invalid next size (fast): 0x0aba7f90 ======= Backtrace: ========= /lib/i386-linux-gnu/libc.so.6(+0x67377)[0x55751377] /lib/i386-linux-gnu/libc.so.6(+0x6d2f7)[0x557572f7] /lib/i386-linux-gnu/libc.so.6(+0x6dc31)[0x55757c31] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x809b814] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x808b4c7] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x8088832] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x80809a7] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x8078740] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x808294f] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x807d50c] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x807de7e] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x807e83e] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x80636a9] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x80502b0] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x804d5f3] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x815124b] /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin/x_synphot.e[0x80ae8a5] /lib/i386-linux-gnu/libc.so.6(__libc_start_main+0xf7)[0x55702637] ======= Memory map: ======== 08048000-08395000 r-xp 00000000 08:15 1769463 /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin.linux/x_synphot.e 08395000-083b8000 rwxp 0034d000 08:15 1769463 /home/qssha/miniconda2/envs/iraf27/iraf_extern/stsdas/bin.linux/x_synphot.e 083b8000-0a97c000 rwxp 00000000 00:00 0 0ab40000-0abbc000 rwxp 00000000 00:00 0 [heap] 55614000-55636000 r-xp 00000000 08:15 4980778 /lib/i386-linux-gnu/ld-2.23.so 55636000-55637000 rwxp 00000000 00:00 0 55637000-55638000 r-xp 00022000 08:15 4980778 /lib/i386-linux-gnu/ld-2.23.so 55638000-55639000 rwxp 00023000 08:15 4980778 /lib/i386-linux-gnu/ld-2.23.so 55639000-5563b000 r--p 00000000 00:00 0 [vvar] 5563b000-5563c000 r-xp 00000000 00:00 0 [vdso] 5563c000-55660000 rwxp 00000000 00:00 0 55660000-55668000 r-xp 00000000 08:15 4985888 /lib/i386-linux-gnu/libnss_compat-2.23.so 55668000-55669000 r-xp 00007000 08:15 4985888 /lib/i386-linux-gnu/libnss_compat-2.23.so 55669000-5566a000 rwxp 00008000 08:15 4985888 /lib/i386-linux-gnu/libnss_compat-2.23.so 5566a000-5566b000 rwxp 00000000 00:00 0 5566f000-556c2000 r-xp 00000000 08:15 4985896 /lib/i386-linux-gnu/libm-2.23.so 556c2000-556c3000 r-xp 00052000 08:15 4985896 /lib/i386-linux-gnu/libm-2.23.so 556c3000-556c4000 rwxp 00053000 08:15 4985896 /lib/i386-linux-gnu/libm-2.23.so 556c4000-556dd000 r-xp 00000000 08:15 4980920 /lib/i386-linux-gnu/libpthread-2.23.so 556dd000-556de000 r-xp 00018000 08:15 4980920 /lib/i386-linux-gnu/libpthread-2.23.so 556de000-556df000 rwxp 00019000 08:15 4980920 /lib/i386-linux-gnu/libpthread-2.23.so 556df000-556e1000 rwxp 00000000 00:00 0 556e1000-556e8000 r-xp 00000000 08:15 4985875 /lib/i386-linux-gnu/librt-2.23.so 556e8000-556e9000 r-xp 00006000 08:15 4985875 /lib/i386-linux-gnu/librt-2.23.so 556e9000-556ea000 rwxp 00007000 08:15 4985875 /lib/i386-linux-gnu/librt-2.23.so 556ea000-5589a000 r-xp 00000000 08:15 4985903 /lib/i386-linux-gnu/libc-2.23.so 5589a000-5589c000 r-xp 001af000 08:15 4985903 /lib/i386-linux-gnu/libc-2.23.so 5589c000-5589d000 rwxp 001b1000 08:15 4985903 /lib/i386-linux-gnu/libc-2.23.so 5589d000-558a1000 rwxp 00000000 00:00 0 558a1000-558ac000 r-xp 00000000 08:15 4980782 /lib/i386-linux-gnu/libnss_files-2.23.so 558ac000-558ad000 r-xp 0000a000 08:15 4980782 /lib/i386-linux-gnu/libnss_files-2.23.so 558ad000-558ae000 rwxp 0000b000 08:15 4980782 /lib/i386-linux-gnu/libnss_files-2.23.so 558ae000-55911000 rwxp 00000000 00:00 0 55942000-55959000 r-xp 00000000 08:15 4980773 /lib/i386-linux-gnu/libnsl-2.23.so 55959000-5595a000 r-xp 00016000 08:15 4980773 /lib/i386-linux-gnu/libnsl-2.23.so 5595a000-5595b000 rwxp 00017000 08:15 4980773 /lib/i386-linux-gnu/libnsl-2.23.so 5595b000-5595d000 rwxp 00000000 00:00 0 5595d000-55968000 r-xp 00000000 08:15 4982075 /lib/i386-linux-gnu/libnss_nis-2.23.so 55968000-55969000 r-xp 0000a000 08:15 4982075 /lib/i386-linux-gnu/libnss_nis-2.23.so 55969000-5596a000 rwxp 0000b000 08:15 4982075 /lib/i386-linux-gnu/libnss_nis-2.23.so 5596a000-55986000 r-xp 00000000 08:15 4982077 /lib/i386-linux-gnu/libgcc_s.so.1 55986000-55987000 rwxp 0001b000 08:15 4982077 /lib/i386-linux-gnu/libgcc_s.so.1 55a00000-55a21000 rwxp 00000000 00:00 0 55a21000-55b00000 ---p 00000000 00:00 0 fff70000-fff91000 rwxp 00000000 00:00 0 [stack] ERROR: abort

How i can fix this?

pllim commented 7 years ago

synphot package in IRAF is not supported anymore. Please use the Python version documented at https://pysynphot.readthedocs.io/en/latest/ . You can install it like this:

conda install pysynphot
qssha commented 7 years ago

thank you!