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asyml / ForteHealth

The project is in the incubation stage and still under development. ForteHealth is a flexible and powerful ML workflow builder for biomedical and clinical scenarios. This is part of the CASL project: http://casl-project.ai/
Apache License 2.0
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Add and integrate visualization to the demo pipeline #8

Closed Piyush13y closed 2 years ago

Piyush13y commented 2 years ago

Is your feature request related to a problem? Please describe. We want to be able to visualize the findings of our medical pipeline, and use UIMA Cas Viewer to show annotations for input data in a graphical interface instead of building a GUI from scratch. Stave isn't stable at this point either for our use case.

Describe the solution you'd like Might have to use some 3rd party adapters to be able to leverage UIMA's Annotation Viewer(written in Java), for our use case.

Describe alternatives you've considered @drishtiramesh looked into Jython, Python annotator, dkpro-cassis as possible options to implement this translation from python to java.

Piyush13y commented 2 years ago

Decided against using UIMA CAS viewer for our pipeline. We will go forward with Stave and make changes to that interface to suit our needs.