athowes / multi-agyw

Spatio-temporal estimates of HIV risk group proportions for AGYW across 13 priority countries in sub-Saharan Africa
https://athowes.github.io/multi-agyw
MIT License
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Fix strange behaviour in ribbon plot #98

Closed athowes closed 2 years ago

athowes commented 2 years ago
ISO3 Issues?
BWA None
CMR Missing direct in {3, 4} 25-29
KEN Missing direct in {3, 4}
LSO None
MOZ Missing direct in {3, 4}
MWI None
NAM None
SWZ Missing direct in {3, 4}
TZA None
UGA Weird spikes, missing direct in {3, 4} 25-29
ZAF Missing direct in {3, 4} 25-29
ZMB Missing direct in {3, 4} 25-29
ZWE None
athowes commented 2 years ago

(One of) the missing categories is really empty. Probably can be traced back to something in the high risk differentiation script.

athowes commented 2 years ago

Need to put shapes for partially raw, then fix UGA bumps, then it's done. :v:

athowes commented 2 years ago

Just the UGA bumps left to finish this.

athowes commented 2 years ago

image

UGA bumps are not just an artefact -- goes deeper (either data issue or model issue, though if model why only here?)

athowes commented 2 years ago

This is gone in the most recent version of the fit. Don't know what the issue was.