I've been testing this out, and in the first step of the pipeline (using jellyfish) it processes a _kmers_sorted.txt file for each sample. These are quite large for me (12-18G), which is annoying large for 200 samples. If I gzip them, will subsequent steps work in the pipeline?
atifrahman
commented
6 years ago
I've been testing this out, and in the first step of the pipeline (using jellyfish) it processes a_kmers_sorted.txt file for each sample. These are quite large for me (12-18G), which is annoying large for 200 samples. If I gzip them, will subsequent steps work in the pipeline?