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atifrahman / SWALO

Scaffolding with assembly likelihood optimization
GNU General Public License v3.0
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Segmentation fault (core dumped) running swalo with parameters #2

Closed ba1 closed 7 years ago

ba1 commented 7 years ago

~/SWALO/swalo displays the help/usage page

~/SWALO/swalo xx Segmentation fault (core dumped)

There was no issue during the building process, though.

atifrahman commented 7 years ago

Can you please provide a bit more details? Did you run the steps needed prior to running swalo as mentioned in the readme? Did you provide swalo with the two required parameters?

ba1 commented 7 years ago

Hey, Thanks for the quick reply. Both answers are yes. There was no error for all prior independent steps. Only the last step running the swalo binary causes this error. The error is independent of the input parameters, probably during loading them or running the routines to parse them

On Aug 23, 2017, 19:09, at 19:09, atifrahman notifications@github.com wrote:

Can you please provide a bit more details? Did you run the steps needed prior to running swalo as mentioned in the readme? Did you provide swalo with the two required parameters?

-- You are receiving this because you authored the thread. Reply to this email directly or view it on GitHub: https://github.com/atifrahman/SWALO/issues/2#issuecomment-324401142

atifrahman commented 7 years ago

Could you please give me the exact command you're running?

atifrahman commented 7 years ago

Also does it print anything before crashing?

ba1 commented 7 years ago

Nevermind, I found the error. My passed maxInsertSize parameter in prior steps was too small.

atifrahman commented 7 years ago

Great!