Error on first running of transformer_scores(text = ...

[ibernetti63]

in the first running of transformer_scores(text = ... I recive the following error: Requirement already satisfied: oauthlib>=3.0.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from requests-oauthlib>=0.7.0->google-auth-oauthlib<1.1,>=0.5->tensorboard<2.15,>=2.14->tensorflow-intel==2.14.1->tensorflow==2.14.1) (3.2.2) Importing transformers and torch modules... Errore in py_module_import(module, convert = convert) : NameError: name '_C' is not defined Run reticulate::py_last_error() for details.

reticulate::py_last_error()

── Python Exception Message ───────────────────────────────────────────────── Traceback (most recent call last): File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 122, in _find_and_load_hook return _run_hook(name, _hook) File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 96, in _run_hook module = hook() File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 120, in _hook return _find_andload(name, import) File "C:\Users\ibern\AppData\Local\R-MINI~1\envs\TRANSF~1\lib\site-packages\transformers__init.py", line 26, in from . import dependency_versions_check File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 122, in _find_and_load_hook return _run_hook(name, _hook) File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 96, in _run_hook module = hook() File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 120, in _hook return _find_andload(name, import) File "C:\Users\ibern\AppData\Local\R-MINI~1\envs\TRANSF~1\lib\site-packages\transformers\dependency_versions_check.py", line 16, in from .utils.versions import require_version, require_version_core File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 122, in _find_and_load_hook return _run_hook(name, _hook) File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 96, in _run_hook module = hook() File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 120, in _hook return _find_andload(name, import) File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 122, in _find_and_load_hook return _run_hook(name, _hook) File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 96, in _run_hook module = hook() File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 120, in _hook return _find_andload(name, import) File "C:\Users\ibern\AppData\Local\R-MINI~1\envs\TRANSF~1\lib\site-packages\transformers\utils__init__.py", line 31, in from .generic import ( File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 122, in _find_and_load_hook return _run_hook(name, _hook) File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 96, in _run_hook module = hook() File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 120, in _hook return _find_andload(name, import) File "C:\Users\ibern\AppData\Local\R-MINI~1\envs\TRANSF~1\lib\site-packages\transformers\utils\generic.py", line 432, in import torch.utils._pytree as _torch_pytree File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 122, in _find_and_load_hook return _run_hook(name, _hook) File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 96, in _run_hook module = hook() File "C:\Users\ibern\AppData\Local\R\win-library\4.2\reticulate\python\rpytools\loader.py", line 120, in _hook return _find_andload(name, import) File "C:\Users\ibern\AppData\Local\R-MINI~1\envs\TRANSF~1\lib\site-packages\torch\init__.py", line 465, in for name in dir(_C): NameError: name '_C' is not defined

── R Traceback ────────────────────────────────────────────────────────────── ▆

1. ├─transforEmotion::transformer_scores(...)
2. │ └─reticulate::import("transformers")
3. │ └─reticulate:::py_module_import(module, convert = convert)
4. ├─base::tryCatch(...)
5. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
6. │ ├─base (local) tryCatchOne(...)
7. │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
8. │ └─base (local) tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
9. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   10. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
   11. └─base::evalq(<fn>(FALSE, 1L), <env>)
   12. └─base::evalq(<fn>(FALSE, 1L), <env>) See reticulate::py_last_error()$r_trace$full_call for more details.

[ibernetti63]

I try on a completly new PC (win 11 Dell) with a fresh install of R and I have a differnt error in the firs run of transformer_scores(text = ... : Importing transformers and torch modules... Errore in py_module_import(module, convert = convert) : TypeError: encode() argument 'encoding' must be str, not int Run reticulate::py_last_error() for details.

reticulate::py_last_error() Errore in py_call_impl(callable, call_args$unnamed, call_args$named) : Evaluation error: TypeError: encode() argument 'encoding' must be str, not int Run reticulate::py_last_error() for details..

[atomashevic]

Hi,

Thanks for opening the issue. The first error, looks like this issue https://github.com/atomashevic/transforEmotion/issues/4. Take a look and see whether any of the solutions proposed there works for your case.

The second error, looks like something else, I'll take a look at both and I'll let you know if there is a fix.

[atomashevic]

@ibernetti63 for the first issue can you give me the output of the following code

library(transforEmotion)
library(reticulate)

transforEmotion:: setup_miniconda()

use_condaenv("transforEmotion", required = TRUE)

py_run_string("import torch; print(torch.__version__)")
py_run_string("import transformers; print(transformers.__version__)")

Also, did you try the example:

# Load data
data(neo_ipip_extraversion)

text <- neo_ipip_extraversion$friendliness[1:5]

# Cross-Encoder DistilRoBERTa
transformer_scores(
 text = text,
 classes = c(
   "friendly", "gregarious", "assertive",
   "active", "excitement", "cheerful"
 )
)

I wasn't able to reproduce both issues on a fresh install (Linux), @AlexChristensen can you try on a Windows machine?

[ibernetti63]

transforEmotionError.txt

Thank you for your quick reply. In the attached text file I have pasted the output of the commands. I used a PC with Windows 11 and R 4.4.1. Before running the commands I uninstalled miniconda to start from a clean situation. Regards Iacopo

[AlexChristensen]

I run Linux on both of my computers, so I won't be able to test Windows.

However, it seems like {pytorch} is acting up. You can try:

reticulate::conda_install(
    envname = "transforEmotion",
    packages = "torch==2.1.1",
    pip = TRUE
)

To make sure {pytorch} installs or is installed.

It would be helpful to have the output of reticulate::py_last_error() whenever there is an error that occurs

[AlexChristensen]

accidentally closed..... reopening

[ibernetti63]

I run Linux on both of my computers, so I won't be able to test Windows.

However, it seems like {pytorch} is acting up. You can try:

reticulate::conda_install(
    envname = "transforEmotion",
    packages = "torch==2.1.1",
    pip = TRUE
)

To make sure {pytorch} installs or is installed.

It would be helpful to have the output of reticulate::py_last_error() whenever there is an error that occurs

library(reticulate) use_condaenv("transforEmotion", required = TRUE) reticulate::conda_install(

• envname = "transforEmotion",
• packages = "torch==2.1.1",
• pip = TRUE
• )

C:\Users\ibern\Documents>CALL "C:\Users\ibern\AppData\Local\r-miniconda\condabin\activate.bat" "transforEmotion"

C:\Users\ibern\Documents>conda.bat activate "transforEmotion" Requirement already satisfied: torch==2.1.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (2.1.1) Requirement already satisfied: filelock in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (3.15.4) Requirement already satisfied: typing-extensions in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (4.12.2) Requirement already satisfied: sympy in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (1.13.2) Requirement already satisfied: networkx in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (3.3) Requirement already satisfied: jinja2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (3.1.4) Requirement already satisfied: fsspec in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (2024.6.1) Requirement already satisfied: MarkupSafe>=2.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from jinja2->torch==2.1.1) (2.1.5) Requirement already satisfied: mpmath<1.4,>=1.1.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from sympy->torch==2.1.1) (1.3.0) [1] "\"torch==2.1.1\""

library(transforEmotion)

transforEmotion (version 0.1.5)

Important: If you are using RStudio, please make sure you have the latest version installed (2023.09.1-494). For help getting started, type browseVignettes("transforEmotion")

For bugs and errors, submit an issue to https://github.com/atomashevic/transforEmotion/issues Before running an analysis for the first time after installing the package, please run transforEmotion::setup_miniconda() to install the necessary Python modules.

Load data

data(neo_ipip_extraversion)

text <- neo_ipip_extraversion$friendliness[1:5]

Cross-Encoder DistilRoBERTa

transformer_scores(

• text = text,
• classes = c(
• "friendly", "gregarious", "assertive",
• "active", "excitement", "cheerful"
• )
• )

Installing modules for 'transforEmotion'...

C:\Users\ibern\Documents>CALL "C:\Users\ibern\AppData\Local\r-miniconda\condabin\activate.bat" "transforEmotion"

C:\Users\ibern\Documents>conda.bat activate "transforEmotion" Requirement already satisfied: accelerate==0.29.3 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (0.29.3) Requirement already satisfied: llama-index==0.10.30 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (0.10.30) Requirement already satisfied: nltk==3.8.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (3.8.1) Requirement already satisfied: pandas==2.1.3 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (2.1.3) Requirement already satisfied: pypdf==4.0.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (4.0.1) Requirement already satisfied: pytz==2024.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (2024.1) Requirement already satisfied: qdrant-client==1.8.2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (1.8.2) Requirement already satisfied: sentencepiece==0.2.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (0.2.0) Requirement already satisfied: sentence-transformers==2.7.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (2.7.0) Requirement already satisfied: tensorflow==2.14.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (2.14.1) Requirement already satisfied: torch==2.1.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (2.1.1) Requirement already satisfied: transformers==4.35.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (4.35.0) Requirement already satisfied: pytubefix==6.9.2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (6.9.2) Requirement already satisfied: numpy>=1.17 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from accelerate==0.29.3) (1.26.4) Requirement already satisfied: packaging>=20.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from accelerate==0.29.3) (24.1) Requirement already satisfied: psutil in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from accelerate==0.29.3) (6.0.0) Requirement already satisfied: pyyaml in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from accelerate==0.29.3) (6.0.2) Requirement already satisfied: huggingface-hub in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from accelerate==0.29.3) (0.17.3) Requirement already satisfied: safetensors>=0.3.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from accelerate==0.29.3) (0.4.4) Requirement already satisfied: llama-index-agent-openai<0.3.0,>=0.1.4 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.2.9) Requirement already satisfied: llama-index-cli<0.2.0,>=0.1.2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.13) Requirement already satisfied: llama-index-core<0.11.0,>=0.10.30 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.10.68.post1) Requirement already satisfied: llama-index-embeddings-openai<0.2.0,>=0.1.5 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.11) Requirement already satisfied: llama-index-indices-managed-llama-cloud<0.2.0,>=0.1.2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.6) Requirement already satisfied: llama-index-legacy<0.10.0,>=0.9.48 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.9.48.post3) Requirement already satisfied: llama-index-llms-openai<0.2.0,>=0.1.13 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.31) Requirement already satisfied: llama-index-multi-modal-llms-openai<0.2.0,>=0.1.3 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.9) Requirement already satisfied: llama-index-program-openai<0.2.0,>=0.1.3 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.7) Requirement already satisfied: llama-index-question-gen-openai<0.2.0,>=0.1.2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.3) Requirement already satisfied: llama-index-readers-file<0.2.0,>=0.1.4 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.33) Requirement already satisfied: llama-index-readers-llama-parse<0.2.0,>=0.1.2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from llama-index==0.10.30) (0.1.6) Requirement already satisfied: click in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from nltk==3.8.1) (8.1.7) Requirement already satisfied: joblib in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from nltk==3.8.1) (1.4.2) Requirement already satisfied: regex>=2021.8.3 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from nltk==3.8.1) (2024.7.24) Requirement already satisfied: tqdm in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from nltk==3.8.1) (4.66.5) Requirement already satisfied: python-dateutil>=2.8.2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from pandas==2.1.3) (2.9.0.post0) Requirement already satisfied: tzdata>=2022.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from pandas==2.1.3) (2024.1) Requirement already satisfied: grpcio>=1.41.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from qdrant-client==1.8.2) (1.66.1) Requirement already satisfied: grpcio-tools>=1.41.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from qdrant-client==1.8.2) (1.62.3) Requirement already satisfied: httpx>=0.20.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from httpx[http2]>=0.20.0->qdrant-client==1.8.2) (0.27.2) Requirement already satisfied: portalocker<3.0.0,>=2.7.0 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from qdrant-client==1.8.2) (2.10.1) Requirement already satisfied: pydantic>=1.10.8 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from qdrant-client==1.8.2) (2.8.2) Requirement already satisfied: urllib3<3,>=1.26.14 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from qdrant-client==1.8.2) (2.2.2) Requirement already satisfied: scikit-learn in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from sentence-transformers==2.7.0) (1.5.1) Requirement already satisfied: scipy in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from sentence-transformers==2.7.0) (1.14.1) Requirement already satisfied: Pillow in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from sentence-transformers==2.7.0) (10.4.0) Requirement already satisfied: tensorflow-intel==2.14.1 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from tensorflow==2.14.1) (2.14.1) Requirement already satisfied: filelock in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (3.15.4) Requirement already satisfied: typing-extensions in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (4.12.2) Requirement already satisfied: sympy in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (1.13.2) Requirement already satisfied: networkx in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (3.3) Requirement already satisfied: jinja2 in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (3.1.4) Requirement already satisfied: fsspec in c:\users\ibern\appdata\local\r-miniconda\envs\transforemotion\lib\site-packages (from torch==2.1.1) (2024.6.1) Requirement already satisfied: requests in 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Errore in py_module_import(module, convert = convert) : TypeError: encode() argument 'encoding' must be str, not int Run reticulate::py_last_error() for details. In aggiunta: Messaggi di avvertimento: 1: In py_run_string_impl(patch, local = TRUE) : Error encountered when flushing python buffers sys.stderr and sys.stdout 2: In py_run_string_impl(patch, local = TRUE) : Error encountered when flushing python buffers sys.stderr and sys.stdout 3: In py_run_string_impl("import sys; sys.path.insert(0, '')", local = TRUE) : Error encountered when flushing python buffers sys.stderr and sys.stdout

[atomashevic]

Hi @ibernetti63,

Can you test the following steps:

reticulate::miniconda_uninstall()

devtools::install_github("atomashevic/transforEmotion@cpu-only-libraries", force = TRUE)

library(transforEmotion)

setup_miniconda()

and then

# Load data
data(neo_ipip_extraversion)

text <- neo_ipip_extraversion$friendliness[1:5]

# Cross-Encoder DistilRoBERTa
transformer_scores(
 text = text,
 classes = c(
   "friendly", "gregarious", "assertive",
   "active", "excitement", "cheerful"
 )
)

Please paste any error or warning messages you get. Thanks for your patience with this issue.