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atuinsh / atuin

✨ Magical shell history
https://atuin.sh
MIT License
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Problems while installing and using. #2224

Closed Unalian closed 1 month ago

Unalian commented 1 month ago

What did you expect to happen?

cargo install atuin works; or curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh works There are some env infos of my system.

$ cargo --version
cargo 1.77.2 (e52e36006 2024-03-26)
$ rustc --version
rustc 1.77.2 (25ef9e3d8 2024-04-09)
$ /lib64/libc.so.6 --version
GNU C Library (GNU libc) stable release version 2.28.
Copyright (C) 2018 Free Software Foundation, Inc.
This is free software; see the source for copying conditions.
There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A
PARTICULAR PURPOSE.
Compiled by GNU CC version 8.5.0 20210514 (Tencent 8.5.0-22).
libc ABIs: UNIQUE IFUNC ABSOLUTE
For bug reporting instructions, please see:
<http://www.gnu.org/software/libc/bugs.html>.

What happened?

cargo install atuin

It seems like fcntl64 is a symbol that is related to glibc.

$ cargo install atuin

    Updating crates.io index
  Installing atuin v18.3.0
    Updating crates.io index
   Compiling atuin v18.3.0
error: linking with `cc` failed: exit status: 1
  |
  = note: LC_ALL="C" PATH="/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/data/home/unashi/.cargo/bin:/data/home/unashi/toolchain/bin:/data/home/unashi/toolchain/bin:/data/home/unashi/toolchain/bin:/root/.cargo/bin:/data/home/unashi/toolchain/bin:/home/linuxbrew/.linuxbrew/bin:/home/linuxbrew/.linuxbrew/sbin:/data/home/unashi/.vscode-server/cli/servers/Stable-89de5a8d4d6205e5b11647eb6a74844ca23d2573/server/bin/remote-cli:/home/linuxbrew/.linuxbrew/bin:/home/linuxbrew/.linuxbrew/sbin:/data/home/unashi/.local/bin:/data/home/unashi/bin:/usr/share/Modules/bin:/usr/lib64/ccache:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/data/home/unashi/TSearchEngine/bin:/data/home/unashi/TSearchEngine/bin:/data/home/unashi/.atuin/bin:/data/home/unashi/TSearchEngine/bin:/data/home/unashi/.atuin/bin:/data/home/unashi/TSearchEngine/bin:/data/home/unashi/.atuin/bin/data/home/unashi/.cargo/bin:/data/home/unashi/.cargo/bin:/data/home/unashi/.cargo/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustccKYmx4/symbols.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.00.rcgu.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.01.rcgu.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.02.rcgu.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.03.rcgu.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.04.rcgu.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.05.rcgu.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.06.rcgu.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.07.rcgu.o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83.atuin.cce2f87d4998bc8-cgu.08.rcgu.o" 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"/tmp/cargo-installVICH25/release/deps/libwant-ae5f0630b4b3864b.rlib" "/tmp/cargo-installVICH25/release/deps/libtry_lock-bfe075f57523218f.rlib" "/tmp/cargo-installVICH25/release/deps/libhttparse-95abfdacc27b4929.rlib" "/tmp/cargo-installVICH25/release/deps/libh2-9d79c16fee696ad7.rlib" "/tmp/cargo-installVICH25/release/deps/libindexmap-d3953ef4a12a3bad.rlib" "/tmp/cargo-installVICH25/release/deps/libequivalent-598f7a77c58e5827.rlib" "/tmp/cargo-installVICH25/release/deps/libhashbrown-e937c39358588a50.rlib" "/tmp/cargo-installVICH25/release/deps/libahash-6132c3c4abc46fee.rlib" "/tmp/cargo-installVICH25/release/deps/libgetrandom-61184fefb693fba3.rlib" "/tmp/cargo-installVICH25/release/deps/libzerocopy-54e7ed066f904fbf.rlib" "/tmp/cargo-installVICH25/release/deps/liballocator_api2-92f40e43f41da674.rlib" "/tmp/cargo-installVICH25/release/deps/libtokio_util-d84b77020eb3b81e.rlib" "/tmp/cargo-installVICH25/release/deps/libtower_service-da7269d8787d86c2.rlib" "/tmp/cargo-installVICH25/release/deps/libtracing-999d092e01708630.rlib" "/tmp/cargo-installVICH25/release/deps/libtracing_core-0a33458c5f6562d7.rlib" "/tmp/cargo-installVICH25/release/deps/libhttpdate-611db53dde3eab53.rlib" "/tmp/cargo-installVICH25/release/deps/libfutures_util-4171793ff016d246.rlib" "/tmp/cargo-installVICH25/release/deps/libmemchr-304506561cc21b31.rlib" "/tmp/cargo-installVICH25/release/deps/libfutures_io-7ca79d59cbf3214c.rlib" "/tmp/cargo-installVICH25/release/deps/libslab-3c1b49ba017db07e.rlib" "/tmp/cargo-installVICH25/release/deps/libfutures_channel-4223e714badc89d7.rlib" "/tmp/cargo-installVICH25/release/deps/libfutures_sink-3fddf266c88bcccb.rlib" "/tmp/cargo-installVICH25/release/deps/libfutures_task-24f565caf142baf0.rlib" "/tmp/cargo-installVICH25/release/deps/libpin_utils-16dfa13894b52270.rlib" "/tmp/cargo-installVICH25/release/deps/libtokio-e301ef3e767279f5.rlib" "/tmp/cargo-installVICH25/release/deps/libsignal_hook_registry-8d7a879ed99e840e.rlib" "/tmp/cargo-installVICH25/release/deps/libnum_cpus-c867ba442ab19de5.rlib" "/tmp/cargo-installVICH25/release/deps/libsocket2-fe5168a75a4d7254.rlib" "/tmp/cargo-installVICH25/release/deps/libmio-0b970094814d697f.rlib" "/tmp/cargo-installVICH25/release/deps/libparking_lot-543cb52b8364ad68.rlib" "/tmp/cargo-installVICH25/release/deps/libparking_lot_core-8c6f2ab0237e236a.rlib" "/tmp/cargo-installVICH25/release/deps/liblibc-3ba5054104ea335d.rlib" "/tmp/cargo-installVICH25/release/deps/libcfg_if-741c6560e4280290.rlib" "/tmp/cargo-installVICH25/release/deps/libsmallvec-a7903020cadc1947.rlib" "/tmp/cargo-installVICH25/release/deps/liblock_api-879121df6ded1996.rlib" "/tmp/cargo-installVICH25/release/deps/libscopeguard-ab00d8199267e341.rlib" "/tmp/cargo-installVICH25/release/deps/libsync_wrapper-9066b2e08ac032e0.rlib" "/tmp/cargo-installVICH25/release/deps/libhttp_body-47efabd1547c5f32.rlib" "/tmp/cargo-installVICH25/release/deps/libpin_project_lite-10eedb833d3f484f.rlib" "/tmp/cargo-installVICH25/release/deps/libfutures_core-fd9b9af4b835efdb.rlib" "/tmp/cargo-installVICH25/release/deps/liburl-3f5aafa4b213789c.rlib" "/tmp/cargo-installVICH25/release/deps/libidna-e6f1cf82bf625c02.rlib" "/tmp/cargo-installVICH25/release/deps/libunicode_normalization-65df936b15f55319.rlib" "/tmp/cargo-installVICH25/release/deps/libtinyvec-3bc8241720b318c2.rlib" "/tmp/cargo-installVICH25/release/deps/libtinyvec_macros-8ccebddd5541bb81.rlib" "/tmp/cargo-installVICH25/release/deps/libunicode_bidi-174636d88624ab6d.rlib" "/tmp/cargo-installVICH25/release/deps/libform_urlencoded-eb2bc30ad3369b82.rlib" "/tmp/cargo-installVICH25/release/deps/libpercent_encoding-4c560078ce04b70d.rlib" "/tmp/cargo-installVICH25/release/deps/libhttp-4c850cdf7dcce8f2.rlib" "/tmp/cargo-installVICH25/release/deps/libitoa-e034c8a95406e078.rlib" "/tmp/cargo-installVICH25/release/deps/libbytes-175ef7f639dc9387.rlib" "/tmp/cargo-installVICH25/release/deps/libfnv-3ffefd5bb16ae602.rlib" "/tmp/cargo-installVICH25/release/deps/liblog-c2cd651264c99272.rlib" "/tmp/cargo-installVICH25/release/deps/librustix-d99d9ba3b1983cce.rlib" "/tmp/cargo-installVICH25/release/deps/libbitflags-e512e21f3005f2bc.rlib" "/tmp/cargo-installVICH25/release/deps/liblinux_raw_sys-4d9ea4524f51496c.rlib" "/tmp/cargo-installVICH25/release/deps/libeyre-06ce3005cb30421e.rlib" "/tmp/cargo-installVICH25/release/deps/libindenter-6b878a9dee1dfc1a.rlib" "/tmp/cargo-installVICH25/release/deps/libonce_cell-0f073d6df33745ce.rlib" "/tmp/cargo-installVICH25/release/deps/libclap-ea4ca02a529fcbe9.rlib" "/tmp/cargo-installVICH25/release/deps/libclap_builder-5911b29c9e6379cb.rlib" "/tmp/cargo-installVICH25/release/deps/libstrsim-e2d8a2ad36c19b11.rlib" "/tmp/cargo-installVICH25/release/deps/libanstream-1160ed5d21a4c947.rlib" "/tmp/cargo-installVICH25/release/deps/libanstyle_query-da9d6cdde338ef18.rlib" "/tmp/cargo-installVICH25/release/deps/libis_terminal_polyfill-bbf2340d51e8f11b.rlib" "/tmp/cargo-installVICH25/release/deps/libcolorchoice-0c14fa4c5f630a99.rlib" "/tmp/cargo-installVICH25/release/deps/libanstyle_parse-0cd6e83635f70d20.rlib" "/tmp/cargo-installVICH25/release/deps/libutf8parse-3133d40faa36dd8a.rlib" "/tmp/cargo-installVICH25/release/deps/libclap_lex-73a100505f880f2f.rlib" "/tmp/cargo-installVICH25/release/deps/libanstyle-1b70537d219ae86b.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-2d08990d644ac786.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-6f2d4ec7ff80253d.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-c194d68892442324.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libmemchr-9a71c52c5946f83b.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-ae9aec4ce2dabc4f.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-6a207457d27610cc.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-fb1d2514710eef16.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd_detect-e36e7ed4b08caeac.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-9e8dafdf0a1b7ecd.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-b218f37fe3c9ce2e.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-20c30954fd9b5ef4.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-6d3dfaf536d51163.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-cb4ce50789112af8.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-9897980a3b548e05.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-b7bd4d010c784af2.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-6d4515df28ba3369.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-e28568c1a21499f7.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-eedf3675950a13c2.rlib" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-715e69127681e2e0.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/data/home/unashi/.rustup/toolchains/1.77-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/cargo-installVICH25/release/deps/atuin-2e679c3d9e33dc83" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-Wl,-O1" "-Wl,--strip-debug" "-nodefaultlibs"
  = note: ld.lld: error: undefined symbol: fcntl64
          >>> referenced by sqlite3.c
          >>>               0343851c9008f270-sqlite3.o:(aSyscall) in archive /tmp/cargo-installVICH25/release/deps/liblibsqlite3_sys-5c93e1ad1aad8c50.rlib
          collect2: error: ld returned 1 exit status

error: could not compile `atuin` (bin "atuin") due to 1 previous error
error: failed to compile `atuin v18.3.0`, intermediate artifacts can be found at `/tmp/cargo-installVICH25`.
To reuse those artifacts with a future compilation, set the environment variable `CARGO_TARGET_DIR` to that path.

curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh not works

$ atuin doctor
atuin: /lib64/libc.so.6: version `GLIBC_2.29' not found (required by atuin)

Can the install works if I don't want to change my glibc version? I see the issue before but it doesn't work for me: https://github.com/atuinsh/atuin/issues/944

Atuin doctor output

$ atuin doctor
atuin: /lib64/libc.so.6: version `GLIBC_2.29' not found (required by atuin)

This atuin is installed by ```curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh

Code of Conduct

ellie commented 1 month ago

@Unalian what was the solution to your issue?

Unalian commented 1 month ago

@Unalian what was the solution to your issue?

I updated the system to get the new version of glibc.