Incompatible with mobie update site

K-Meech commented 3 years ago

The current imagej-utils jar I ship is incompatible with mobie.

Opening mobie (with platybrowser datasets) with both enabled leads to the error:

java.lang.NoSuchMethodError: de.embl.cba.bdv.utils.BdvUtils.getViewerFrame(Lbdv/util/BdvHandle;)Lbdv/viewer/ViewerFrame;
    at de.embl.cba.mobie.viewer.SourcesPanel.addSourceToViewer(SourcesPanel.java:372)
    at de.embl.cba.mobie.viewer.SourcesPanel.addSourceToPanelAndViewer(SourcesPanel.java:338)
    at de.embl.cba.mobie.viewer.SourcesPanel.addSourceToPanelAndViewer(SourcesPanel.java:295)
    at de.embl.cba.mobie.bookmark.BookmarksManager.addSourcesToPanelAndViewer(BookmarksManager.java:46)
    at de.embl.cba.mobie.bookmark.BookmarksManager.setView(BookmarksManager.java:32)
    at de.embl.cba.mobie.viewer.MoBIEViewer.<init>(MoBIEViewer.java:99)
    at de.embl.cba.mobie.viewer.MoBIEViewer.<init>(MoBIEViewer.java:59)
    at de.embl.cba.mobie.command.OpenMoBIEProjectCommand.run(OpenMoBIEProjectCommand.java:19)
    at org.scijava.command.CommandModule.run(CommandModule.java:196)
    at org.scijava.module.ModuleRunner.run(ModuleRunner.java:165)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:124)
    at org.scijava.module.ModuleRunner.call(ModuleRunner.java:63)
    at org.scijava.thread.DefaultThreadService.lambda$wrap$2(DefaultThreadService.java:225)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    at java.lang.Thread.run(Thread.java:748)

K-Meech commented 3 years ago

@tischi - any idea why this happens? Has something changed between the latest snapshot & the version you ship with mobie?

tischi commented 3 years ago

@K-Meech ...very likely the issue likely is that the imagej-utils that I ship with MoBIE is quite old. The problem is that I could not deploy the very latest version of MoBIE due to this issue: https://github.com/fiji/fiji/issues/263 I hope this gets resolved very soon!

K-Meech commented 2 years ago

The update sites are compatible now

automated-ultramicrotomy / crosshair

Incompatible with mobie update site #5