automl / RNAformer

Scalable Deep Learning for RNA Secondary Structure Prediction
Apache License 2.0
27 stars 9 forks source link

A question about the comparison experiments #3

Closed Decem-Y closed 10 months ago

Decem-Y commented 1 year ago

Great work, but the experiments do not compare to the comparison experiments for models such as 0.5M, 2M, 8M to add recycling. Can you explain it? Looking forward to your reply.

Decem-Y commented 12 months ago

@JoergFranke Very much looking forward to you answering this question.

JoergFranke commented 10 months ago

Sorry for the late reply! For the submission, we didn't run the recycling on every scale since a recycling run takes way more time. In the meantime we did and it always improved the performance.

Decem-Y commented 10 months ago

Thanks for your reply.