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Diamond and MEGAN-like #8

Open averagehat opened 4 years ago

averagehat commented 4 years ago

[ ] Run DIAMOND on all input reads (after deduplication and host-mapping) [ ] Do some analysis with MEGAN or if MEGAN does not have a command-line interface, some alternative [RESEARCH] [ ] mark those reads that contributed to contigs with the contig ID (and contamination info included in contig ID)

averagehat commented 4 years ago

Start of this (items one and two) due Wednesday Oct 30