Closed cfregly closed 6 months ago
This is a known issue with enroot/pyxis described here: https://github.com/NVIDIA/enroot/issues/180#issuecomment-1971965852
Some options are the following: 1/ Extract the dataset onto FSx, but this creates many small files which may not be optimal.
2/ Extract the dataset onto each worker node's local NVMe disk for better performance
3/ Use squashfuse
and autofs
per https://github.com/NVIDIA/enroot/issues/180#issuecomment-1971965852
In an attempt to improve performance, the user has copied the SquashFS image (which contains their dataset) onto FSx - and trying to mount the SquashFS image into the docker container with --container-mounts.
However, enroot/pyxis could not access the mounted SquashFS files as enroot/pyxis does not support SquashFS mounts, it seems.