Installation Error

[kennethleungty]

Hi there,

When I created a new conda environment and install datawig with pip, I get the following error:

` error: subprocess-exited-with-error

× Preparing metadata (pyproject.toml) did not run successfully. │ exit code: 1 ╰─> [145 lines of output] setup.py:461: UserWarning: Unrecognized setuptools command ('dist_info --egg-base C:\Users\kenne\AppData\Local\Temp\pip-modern-metadata-4izsctdl'), proceeding with generating Cython sources and expanding templates warnings.warn("Unrecognized setuptools command ('{}'), proceeding with " setup.py:563: DeprecationWarning:

    `numpy.distutils` is deprecated since NumPy 1.23.0, as a result
    of the deprecation of `distutils` itself. It will be removed for
    Python >= 3.12. For older Python versions it will remain present.
    It is recommended to use `setuptools < 60.0` for those Python versions.
    For more details, see:
      https://numpy.org/devdocs/reference/distutils_status_migration.html

    from numpy.distutils.core import setup
  Running from SciPy source directory.
  INFO: lapack_opt_info:
  INFO: lapack_armpl_info:
  INFO: No module named 'numpy.distutils._msvccompiler' in numpy.distutils; trying from distutils
  INFO: customize MSVCCompiler
  INFO:   libraries armpl_lp64_mp not found in ['C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\lib', 'C:\\', 'C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\libs', 'C:\\ProgramData\\Anaconda3\\Library\\lib']
  INFO:   NOT AVAILABLE
  INFO:
  INFO: lapack_mkl_info:
  INFO:   libraries mkl_rt not found in ['C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\lib', 'C:\\', 'C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\libs', 'C:\\ProgramData\\Anaconda3\\Library\\lib']
  INFO:   NOT AVAILABLE
  INFO:
  INFO: openblas_lapack_info:
  INFO:   libraries openblas not found in ['C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\lib', 'C:\\', 'C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\libs', 'C:\\ProgramData\\Anaconda3\\Library\\lib']
  INFO: get_default_fcompiler: matching types: '['gnu', 'intelv', 'absoft', 'compaqv', 'intelev', 'gnu95', 'g95', 'intelvem', 'intelem', 'flang']'
  INFO: customize GnuFCompiler
  WARN: Could not locate executable g77
  WARN: Could not locate executable f77
  INFO: customize IntelVisualFCompiler
  WARN: Could not locate executable ifort
  WARN: Could not locate executable ifl
  INFO: customize AbsoftFCompiler
  WARN: Could not locate executable f90
  INFO: customize CompaqVisualFCompiler
  WARN: Could not locate executable DF
  INFO: customize IntelItaniumVisualFCompiler
  WARN: Could not locate executable efl
  INFO: customize Gnu95FCompiler
  WARN: Could not locate executable gfortran
  WARN: Could not locate executable f95
  INFO: customize G95FCompiler
  WARN: Could not locate executable g95
  INFO: customize IntelEM64VisualFCompiler
  INFO: customize IntelEM64TFCompiler
  WARN: Could not locate executable efort
  WARN: Could not locate executable efc
  INFO: customize PGroupFlangCompiler
  WARN: Could not locate executable flang
  WARN: don't know how to compile Fortran code on platform 'nt'
  INFO:   NOT AVAILABLE
  INFO:
  INFO: openblas_clapack_info:
  INFO:   libraries openblas,lapack not found in ['C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\lib', 'C:\\', 'C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\libs', 'C:\\ProgramData\\Anaconda3\\Library\\lib']
  INFO:   NOT AVAILABLE
  INFO:
  INFO: flame_info:
  INFO:   libraries flame not found in ['C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\lib', 'C:\\', 'C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\libs', 'C:\\ProgramData\\Anaconda3\\Library\\lib']
  INFO:   NOT AVAILABLE
  INFO:
  INFO: accelerate_info:
  INFO:   NOT AVAILABLE
  INFO:
  INFO: atlas_3_10_threads_info:
  INFO: Setting PTATLAS=ATLAS
  INFO:   libraries tatlas,tatlas not found in C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\lib
  INFO:   libraries tatlas,tatlas not found in C:\
  INFO:   libraries tatlas,tatlas not found in C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\libs
  INFO:   libraries tatlas,tatlas not found in C:\ProgramData\Anaconda3\Library\lib
  INFO: <class 'numpy.distutils.system_info.atlas_3_10_threads_info'>
  INFO:   NOT AVAILABLE
  INFO:
  INFO: atlas_3_10_info:
  INFO:   libraries satlas,satlas not found in C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\lib
  INFO:   libraries satlas,satlas not found in C:\
  INFO:   libraries satlas,satlas not found in C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\libs
  INFO:   libraries satlas,satlas not found in C:\ProgramData\Anaconda3\Library\lib
  INFO: <class 'numpy.distutils.system_info.atlas_3_10_info'>
  INFO:   NOT AVAILABLE
  INFO:
  INFO: atlas_threads_info:
  INFO: Setting PTATLAS=ATLAS
  INFO:   libraries ptf77blas,ptcblas,atlas not found in C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\lib
  INFO:   libraries ptf77blas,ptcblas,atlas not found in C:\
  INFO:   libraries ptf77blas,ptcblas,atlas not found in C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\libs
  INFO:   libraries ptf77blas,ptcblas,atlas not found in C:\ProgramData\Anaconda3\Library\lib
  INFO: <class 'numpy.distutils.system_info.atlas_threads_info'>
  INFO:   NOT AVAILABLE
  INFO:
  INFO: atlas_info:
  INFO:   libraries f77blas,cblas,atlas not found in C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\lib
  INFO:   libraries f77blas,cblas,atlas not found in C:\
  INFO:   libraries f77blas,cblas,atlas not found in C:\Program Files\WindowsApps\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\libs
  INFO:   libraries f77blas,cblas,atlas not found in C:\ProgramData\Anaconda3\Library\lib
  INFO: <class 'numpy.distutils.system_info.atlas_info'>
  INFO:   NOT AVAILABLE
  INFO:
  INFO: lapack_info:
  INFO:   libraries lapack not found in ['C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\lib', 'C:\\', 'C:\\Program Files\\WindowsApps\\PythonSoftwareFoundation.Python.3.10_3.10.1776.0_x64__qbz5n2kfra8p0\\libs', 'C:\\ProgramData\\Anaconda3\\Library\\lib']
  INFO:   NOT AVAILABLE
  INFO:
  C:\Users\kenne\AppData\Local\Temp\pip-build-env-bspg252c\overlay\Lib\site-packages\numpy\distutils\system_info.py:1902: UserWarning:
      Lapack (http://www.netlib.org/lapack/) libraries not found.
      Directories to search for the libraries can be specified in the
      numpy/distutils/site.cfg file (section [lapack]) or by setting
      the LAPACK environment variable.
    return getattr(self, '_calc_info_{}'.format(name))()
  INFO: lapack_src_info:
  INFO:   NOT AVAILABLE
  INFO:
  C:\Users\kenne\AppData\Local\Temp\pip-build-env-bspg252c\overlay\Lib\site-packages\numpy\distutils\system_info.py:1902: UserWarning:
      Lapack (http://www.netlib.org/lapack/) sources not found.
      Directories to search for the sources can be specified in the
      numpy/distutils/site.cfg file (section [lapack_src]) or by setting
      the LAPACK_SRC environment variable.
    return getattr(self, '_calc_info_{}'.format(name))()
  INFO:   NOT AVAILABLE
  INFO:
  Traceback (most recent call last):
    File "C:\Users\kenne\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.10_qbz5n2kfra8p0\LocalCache\local-packages\Python310\site-packages\pip\_vendor\pep517\in_process\_in_process.py", line 363, in <module>
      main()
    File "C:\Users\kenne\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.10_qbz5n2kfra8p0\LocalCache\local-packages\Python310\site-packages\pip\_vendor\pep517\in_process\_in_process.py", line 345, in main
      json_out['return_val'] = hook(**hook_input['kwargs'])
    File "C:\Users\kenne\AppData\Local\Packages\PythonSoftwareFoundation.Python.3.10_qbz5n2kfra8p0\LocalCache\local-packages\Python310\site-packages\pip\_vendor\pep517\in_process\_in_process.py", line 164, in prepare_metadata_for_build_wheel
      return hook(metadata_directory, config_settings)
    File "C:\Users\kenne\AppData\Local\Temp\pip-build-env-bspg252c\overlay\Lib\site-packages\setuptools\build_meta.py", line 161, in prepare_metadata_for_build_wheel
      self.run_setup()
    File "C:\Users\kenne\AppData\Local\Temp\pip-build-env-bspg252c\overlay\Lib\site-packages\setuptools\build_meta.py", line 253, in run_setup
      super(_BuildMetaLegacyBackend,
    File "C:\Users\kenne\AppData\Local\Temp\pip-build-env-bspg252c\overlay\Lib\site-packages\setuptools\build_meta.py", line 145, in run_setup
      exec(compile(code, __file__, 'exec'), locals())
    File "setup.py", line 588, in <module>
      setup_package()
    File "setup.py", line 584, in setup_package
      setup(**metadata)
    File "C:\Users\kenne\AppData\Local\Temp\pip-build-env-bspg252c\overlay\Lib\site-packages\numpy\distutils\core.py", line 135, in setup
      config = configuration()
    File "setup.py", line 499, in configuration
      raise NotFoundError(msg)
  numpy.distutils.system_info.NotFoundError: No BLAS/LAPACK libraries found.
  To build Scipy from sources, BLAS & LAPACK libraries need to be installed.
  See site.cfg.example in the Scipy source directory and
  https://docs.scipy.org/doc/scipy/reference/building/index.html for details.
  [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip. error: metadata-generation-failed

× Encountered error while generating package metadata. ╰─> See above for output.`

I face this issue for both Python version 3.8 and 3.10.

[kennethleungty]

Hi all,

Managed to find the solution to this. It seems like Datawig is compatible with Python version 3.7 and below.

To make it work, create a conda environment with Python version 3.7, and do a pip install datawig from there

[ildelma]

I'll add. It seems that no 3.7.x version other than 3.7.0 works, so go with that.

[zhimin-z]

I'll add. It seems that no 3.7.x version other than 3.7.0 works, so go with that.

Hi, is there any way to deal with it now? I found there is so many dependency issues when using 3.7.0 in VSCode

[felixbiessmann]

HiThanks a lot for your interest (and patience)!We addressed some dependency issues in https://github.com/awslabs/datawig/pull/156 - this was merged to the main branch but it’s not yet released on pypi due to permission issues.As the Datawig authors do not have access to the repo anymore we will hopefully soon release a forked and updated version.For now you could try and download the latest version from GitHub and install from source with pip with pip install -e .In the downloaded source directory. That version should be compatible with python 3.8 and some more recent dependency versions.Hope this helps?Best wishesFelixAm 22.04.2023 um 23:38 schrieb JIMMY ZHAO @.***>:

I'll add. It seems that no 3.7.x version other than 3.7.0 works, so go with that.

Hi, is there any way to deal with it now? I found there is so many dependency issues when using 3.7.0 in VSCode

—Reply to this email directly, view it on GitHub, or unsubscribe.You are receiving this because you are subscribed to this thread.Message ID: @.***>

[zhimin-z]

@felixbiessmann Just wondering how to use this without pip install?