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ay-lab / fithic

Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.
MIT License
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fragmentMid #59

Closed BenxiaHu closed 2 years ago

BenxiaHu commented 2 years ago

Hello, would you like to tell me what fragmentMid reperesent? how to get the coordinates of 2 loop anchors?

image
ay-lab commented 2 years ago

the mid point of the fragment. if your resolution is r, the full coordinates will be: mid - r/2, mid + r/2