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azizilab / starfysh

Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology
BSD 3-Clause "New" or "Revised" License
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ERROR: Cannot install large-image and large-image[sources]==1.0.0 because these package versions have conflicting dependencies. #37

Closed ansonkn closed 7 months ago

ansonkn commented 7 months ago

Thank you for creating this intereseting tool!

I have been struggling to install Starfysh following the installation guide. I get the conflicting below.

ERROR: Cannot install large-image and large-image[sources]==1.0.0 because these package versions have conflicting dependencies.

I have tried different version of python and within virtual environments. Any help would be greatly appreciated.

YinuoJin commented 7 months ago

Hi ansonkn,

Thanks for reaching out and for using Starfysh! We've noticed the "large-image" relevant installation issues. Wondering whether the following command might work for you: pip install histomicstk --find-links https://girder.github.io/large_image_wheels?

ansonkn commented 7 months ago

Thank you Yinuo, the suggested install worked! Thank you for your quick response.