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bAIo-lab / muvis

multivariate analysis and visualization
https://baio-lab.github.io/muvis/rd.html#plot
GNU General Public License v3.0
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failure in installing muvis on ubuntu 19.10 #3

Open audachang opened 4 years ago

audachang commented 4 years ago

operating system: Linux 5.3.0-23-generic #25-Ubuntu SMP x86_64 R version: 3.6.2

running the following command to install muvis package 

devtools::install_github("bAIo-lab/muvis")

resulted in the following error: namespace_highcharater_error

audachang commented 4 years ago

My hunch is that it is related to the deprecation of hc_add_series_scatter() in highcharter package https://github.com/luciojp/DidaticaAD1/issues/1

The author of highcharter recommend to replace hc_add_series_scatter() with highchart()

In my R, 

highcharter::hc_add_series_scatter

gives the error message below:

Error: 'hc_add_series_scatter' is not an exported object from 'namespace:highcharter'

My R skill is not savvy enough to make such change. Any help would be appreciated!!

audachang commented 4 years ago

As a workaround:

BiocManager::install("highcharter")

before install muvis with devtools fix the problem. Apparently BiocManager uses a different fork of highcharter which still has hc_add_series_scatter(). This works but is not straighforward at all. It would be nice if muvis can be updated to keep up with highcharter.

EliHei2 commented 4 years ago

@audachang thanks for informing us about that. new version of muvis we be out soon. we've solved many of such inconsistencies.

LCapitani commented 3 years ago

Any updates? Facing the same issue.