Closed jdaeth274 closed 3 years ago
Thanks - unfortunately, I'm struggling to reproduce this - can you do a local reinstall of popunk_refine
by removing the existing compiled code, which can be located through:
import poppunk_refine
poppunk_refine.__file__
Then install through conda, or remake the local install with:
rm -rf build
python setup.py build
python setup.py install
Can you let me know if that changes anything?
Thanks Nick, that's sorted it out now, previously I was using poppunk_refine v2.2.0, updating appears to have fixed it
Versions PopPUNK v2.4.4 PopPUNK-sketch v1.7.0
Command used and output returned
The error message:
Describe the bug When creating the distance sketches, poppunk gets past the initial prop N QC then appears to fail at the distance QC step.