extract genome assemblies from database

bacpop / PopPUNK

PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

https://www.bacpop.org/poppunk

Apache License 2.0

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Closed reaset41 closed 10 months ago

reaset41 commented 10 months ago

Is it possible to extract the genome assemblies from the PopPUNK database?

nickjcroucher commented 10 months ago

No - the full sequences are not stored in the databases - only hashes of the sampled k-mers.