bacpop / PopPUNK

PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)
https://www.bacpop.org/poppunk
Apache License 2.0
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Avoid overwriting external clustering in visualise script #305

Closed nickjcroucher closed 3 months ago

nickjcroucher commented 3 months ago

@EmmaLRussell pointed out beebop is being scuppered by the overwriting of external clustering in the visualisation code - I think this fixes the problem and at least adds a test for running this mode of visualisation, although we might need to check it actually outputs the correct clustering at some point. But if we can release to conda we can get the new version of beebop out soon.

johnlees commented 3 months ago

Looks good, I will make a release now so we can get on bioconda tomorrow