Output external clusterings with visualisations

bacpop / PopPUNK

PopPUNK 👨‍🎤 (POPulation Partitioning Using Nucleotide Kmers)

https://www.bacpop.org/poppunk

Apache License 2.0

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Closed nickjcroucher closed 3 months ago

nickjcroucher commented 3 months ago

Some fixes to the code, and added a new test (test_beebop.py), although not sure if this is being run with the CI? Code not perfect but better.

nickjcroucher commented 3 months ago

@EmmaLRussell has confirmed this enables beebop to produce networks annotated with external clustering.

nickjcroucher commented 3 months ago

Version bumped in d5179fd, thank you for the quick review!