Open yayahoho1 opened 1 year ago
Can i just use one arguments --refs or --reads?
Hi, you can generate the input file as normal using ‘ls -d -1 $PWD/*.fastq > input.txt’, the read1 and read2 files will be on different lines as paired end information isn’t used to generate unitigs. You can also just use the ‘—reads’ flag.
Hi, if paired-end reads would be used in call mode, how to generate a input file? would read1 and read2 be in different rows?
thanks in advance !