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bacpop / unitig-caller

Methods to determine sequence element (unitig) presence/absence
Apache License 2.0
18 stars 3 forks source link

Bug - incorrect file names not being reported to user #5

Closed SionBayliss closed 3 years ago

SionBayliss commented 3 years ago

Hi John,

Only a minor bug I found when not following your detailed README closely enough.

If the files are not specified as 'reads.txt' or 'refs.txt' then the return statements at line 93 of bifrost.py doesn't interrupt the script and print the error message. It gives a file not found *.gfa error instead. 

 else:
        return "Please submit input files as 'reads.txt' or 'refs.txt' only"

All the best, Sion

johnlees commented 3 years ago

Duplicate of #6, closing and responding there