CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: https://git.io/ciatah_docs. Formerly known as calciumImagingAnalysis (ciapkg).
signalSorter - Allow zoom and other functionality and a lock-check to prevent skipping forward to new cells based on pressing keyboard too long carrying over keypress into next source output, causing it to skip over outputs.
signalSorter - changed how axes are called to allow more flexibility with other UI elements.
signalSorter - Added progress bar for cell, non-cell, and unknown.
viewAcceptedRejectedCellExtraction - additional options to improve display.
Change additional functions that download and load external software packages to use '_external_programs' folder.
Added a general github repo downloader, at the moment supports NoRMCorre, additional support coming.
Checked whole pipeline on Windows with MATLAB 2018b and functional (see below for ICA, CNMF, CNMF-E, and ROI analysis). Outside software now in _external_programs.
signalSorter
- Allow zoom and other functionality and a lock-check to prevent skipping forward to new cells based on pressing keyboard too long carrying over keypress into next source output, causing it to skip over outputs.signalSorter
- changed how axes are called to allow more flexibility with other UI elements.signalSorter
- Added progress bar for cell, non-cell, and unknown.viewAcceptedRejectedCellExtraction
- additional options to improve display.