Issue with computeMatchObjBtwnTrials

[omidm7]

Hi Biafra, After "modelVarsFromFiles", I'm trying to run computeMatchObjBtwnTrials, and get the following error:

I was successfully able to do this with the same data set just last week.. so I'm probably just making a stupid mistake. Any ideas what would cause this?

Omid

[omidm7]

Sorry - Here's the full output

[bahanonu]

hey Omid, think I know what the issues are, I can push a quick patch to deal with this:

• suptitle error has to do with a Bioinformatics toolbox function I moved into ciapkg to prevent overloading Matlab functions, but it seems you don't have that toolbox installed, hence the first error.
• ciapkg.loadBatchFxns error is likely because running macOS or Linux, I'll fix the folder separator call (currently \ vs. filesep).

Couple quick questions:

• What's the output of ciapkg.version and ciapkg.io.matlabToolboxCheck?
• Are you running this on macOS or Linux?

[omidm7]

Thanks, Biafra.

ciapkg.version = 'v3.35.1'

ciapkg.io.matlabToolboxCheck reveals missing 2nd tier toolboxes (including bioinformatics), I will install.

I’m using macOS. Thanks again!

Omid

On Aug 24, 2021, at 13:56, Biafra Ahanonu @.**@.>> wrote:

hey Omid, think I know what the issues are, I can push a quick patch to deal with this:

• suptitle error has to do with a Bioinformatics toolbox function I moved into ciapkg to prevent overloading Matlab functions, but it seems you don't have that toolbox installed, hence the first error.
• ciapkg.loadBatchFxns error is likely because running macOS or Linux, I'll fix the folder separator call (currently \ vs. filesep).

Couple quick questions:

• What's the output of ciapkg.version and ciapkg.io.matlabToolboxCheck?
• Are you running this on macOS or Linux?

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[bahanonu]

@omidm7 Great, thanks for the additional info. Pushed an update, can you try the current master branch and let me know if the issue still arises?

[omidm7]

@bahanonu I just tried it on the current master branch and it works fine. Thanks! Omid

[bahanonu]

Great! 👏