Evaluation Mask Level in Evaluation_FROC

baidu-research / NCRF

Cancer metastasis detection with neural conditional random field (NCRF)

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Evaluation Mask Level in Evaluation_FROC #30

Closed usamabaig1 closed 5 years ago

usamabaig1 commented 5 years ago

Can the Evaluation_Mask_Level in Evaluation_FROC can be different from the level at which the probability map was generated? I mean you generated the prob maps at level 6 but evaluation is done at level 5. Any particular reason behind this? p.s. I generated ground truth tif file mask at level 6. Does it matter? Thankyou. https://github.com/baidu-research/NCRF/blob/1c8987f73e2ccf717b605eb28913d47b4390c13d/wsi/bin/Evaluation_FROC.py#L214

yil8 commented 5 years ago

@usamabaig1 The Evaluation_FROC level was set by the Camelyon16 competition organizers. Therefore, I guess it's better not change it so the results are comparable. It's an arbitrary choice for me to set level 6 for generating probability map. I haven't tried other levels, but I guess it won't matter that much.