baker-laboratory / RoseTTAFold-All-Atom

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Run From Anywhere #125

Open BrandonFrenz opened 3 months ago

BrandonFrenz commented 3 months ago

This PR updates all the relevant code so that jobs can be launched from any directory as long as the proper environment variables are set. It is intended to be fully backward compatible with the existing method of running from the main directory.

This PR also includes a docker file capable of building a container that can run RoseTTAFoldAllAtom, as well as an update to the READ.ME which describes how to use it and a new directory with an example for how to run a job inside the docker container.