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Failed to find "UniRef ID" in *_pdb.ffindex #147

Closed soic-oza closed 4 weeks ago

soic-oza commented 1 month ago

Hello RoseTTAFold team,

I am encountering an issue when running the following command on my environment:

$ python -m rf2aa.run_inference --config-name protein_na_sm

The command results in the following errors:

Failed to find UniRef100_A0A060X4K1 in *_pdb.ffindex
Failed to find UniRef100_A0A069S1Y6 in *_pdb.ffindex
Failed to find UniRef100_A0A009FRF0 in *_pdb.ffindex
Failed to find UniRef100_A0A061NBD2 in *_pdb.ffindex
Failed to find UniRef100_A0A075FI97 in *_pdb.ffindex
Failed to find UniRef100_A0A081D6A3 in *_pdb.ffindex
...

In the intermediate files t000.hhr and t000.atab, these UniRef IDs are indeed listed, but the corresponding PDB IDs are not. Could you please help me understand how to resolve this issue?

Thank you very much for your assistance!

soic-oza commented 4 weeks ago

Thank you for your time and consideration. I have managed to resolve the issue on my own, so I will be closing this issue now. Thanks again!