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Failed to find 6azb_A in *_pdb.ffindex #62

Open BigMary2001 opened 7 months ago

BigMary2001 commented 7 months ago

When I ran the RFAA, I met an error: Failed to find 6azb_A in *_pdb.ffindex. I searched the "6azb_A", there are indeed no "6azb_A" in "pdb100_2021Mar03_pdb.ffindex" file. How can I ignore or solve this problem? My command is: python -m rf2aa.run_inference --config-name protein_sm

Qmi3 commented 7 months ago

I met the same error, it is actually that some entry id in _hmm.ffindex do not exist in _pdb.ffindex, anybody can help with this problem

crypticmx commented 6 months ago

When trying to predict a homodimeric protein interaction with a small molecule I always run into this error:

Failed to find 6i2t_J in _pdb.ffindex Failed to find 6e5x_B in _pdb.ffindex

what is the source of this problem, how can i solve this problem?

rglee0103 commented 1 day ago

Is this problem solved? I am having same error with 6kif_A

BigMary2001 commented 1 day ago

This error seems to have no impact, as there is an output .pdb file.

rglee0103 commented 7 hours ago

Thank you!!