Can RFaa can do chain breaks

baker-laboratory / rf_diffusion_all_atom

Public RFDiffusionAA repo

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Can RFaa can do chain breaks #23

Open annaznk97 opened 3 months ago

annaznk97 commented 3 months ago

Sorry for the silly question. Probably there is also an easy way to find out the solution. However, I am not that experienced with computational protein design.

I want to specify that I want to inpaint in the presence of a separate chain.

For Rfdiffusion it works like that: 'contigmap.contigs=[5-15/A10-25/30-40/0 B1-100]

But the nomenclature for RfdiffusionAA is a bit different. with , instead of /.

So how can I incorporate the presence of a separate chain ?

LeonieMW commented 1 week ago

Hi, did you find a solution for this? I've come as far as getting the following error: "contig_list with >1 element not curently supported" so I guess it's not working as of now. Thanks :)