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banma12956 / AcrNET

Inference code for AcrNET
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Are there any usage guidelines for local version? #2

Open uyghbo opened 1 year ago

uyghbo commented 1 year ago

I used the web version of AcrNET and found it to be an excellent software!

I have a batch of protein sequences (in FASTA format). How do I use the software to predict scores and 0/1 outcomes, similar to the website?

banma12956 commented 1 year ago

Hello there!

We greatly appreciate your interest in our website.

To utilize the local model, kindly proceed by following the instructions outlined in the paper. You'll need to acquire features such as PSSM, acc, ss3, and others using tools like RaptorX, POSSUM, and ESM-1b. Once obtained, these features should be input into the model through the process detailed in the 'test.py' file.

Moreover, you're welcome to tailor the model to your requirements. This includes the option to modify the model's dimensional aspects to align with the available features.

Should you have any queries or need further assistance, please don't hesitate to reach out.

uyghbo commented 1 year ago

Thank you for your response. I will have try.