barahona-research-group / PyGenStability

PyGenStability: Multiscale community detection with generalized Markov Stability
https://barahona-research-group.github.io/PyGenStability/
GNU General Public License v3.0
32 stars 11 forks source link

multiscale example #45

Closed arnaudon closed 2 years ago

arnaudon commented 2 years ago

Definitely!

arnaudon commented 2 years ago

make plots of VI(ground_truth_i, best_comm_time) to show that at the scales we match each ground truth

d-schindler commented 2 years ago

I defined node_id's for the fine, middle and coarse scales which can be used for the a posteriori comparison with the community id's from MS analysis.

codecov-commenter commented 2 years ago

Codecov Report

Merging #45 (32836e1) into master (5d3c63b) will increase coverage by 3.94%. The diff coverage is 68.42%.

@@            Coverage Diff             @@
##           master      #45      +/-   ##
==========================================
+ Coverage   40.89%   44.83%   +3.94%     
==========================================
  Files           8        8              
  Lines         560      571      +11     
==========================================
+ Hits          229      256      +27     
+ Misses        331      315      -16     
Flag Coverage Δ
pytest 44.83% <68.42%> (+3.94%) :arrow_up:

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
src/pygenstability/plotting.py 0.00% <0.00%> (ø)
src/pygenstability/contrib/optimal_scales.py 38.18% <100.00%> (+38.18%) :arrow_up:
src/pygenstability/pygenstability.py 93.79% <100.00%> (+0.30%) :arrow_up:

:mega: Codecov can now indicate which changes are the most critical in Pull Requests. Learn more