barbrakr / CLF-python

Cortical Lesion Finder in Python (work in progress, not a medical tool)
GNU General Public License v3.0
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installation issue (ubuntu env on windows) #6

Open jonkingseestheworld opened 4 years ago

jonkingseestheworld commented 4 years ago

If you also encounter any installation issues, it may be worth trying out the following first.

Before running the installation command on requirement.txt, probably worth running also the conda-forge package (a storage of repositories of conda recipes). It helps me install most of the packages in the requirement.txt

conda config --add channels conda-forge
conda config --set channel_priority strict

Then, run the conda installation line

conda install --file requirements.txt

(As a Conda-Users, using Ubuntu environment on Windows) I also had to install the following myself in separete lines after running the requirements.txt

niflow-nipype1-workflows==0.0.4

pip install niflow-nipype1-workflows

dcm2niix==4.7.12

conda install dcm2niix