Open jeffreybarrick opened 5 years ago
@ShreyasKudari I'm going to start working on this. Let me know if that conflicts with any of your plans.
Hello, is there a status update on Step 3? Wondering if there are any plans for when work on this might happen. Thanks.
No one is working on it at present since we do not have any funding specifically for breseq development.
Motivation: There are many steps within breseq that could be easily parallelized to speed up execution.
Implementation: Use a thread pool that relies only on C++11 std:thread to maximize portability. This header can help implement the thread pool: https://github.com/vit-vit/ctpl