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barricklab / breseq

breseq is a computational pipeline for finding mutations relative to a reference sequence in short-read DNA resequencing data. It is intended for haploid microbial genomes (<20 Mb). breseq is a command line tool implemented in C++ and R.
http://barricklab.org/breseq
GNU General Public License v2.0
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FATAL ERROR #324

Closed airbender97 closed 1 year ago

airbender97 commented 1 year ago

Hello,

I have a problem while doing a test drive.

"Could not open reference file"

Ekran Alıntısı

jeffreybarrick commented 1 year ago

This error indicates that the file NC_012967.gbk is not found at the path you gave for it with the -r option. Check that it has the correct name and is present in your current directory using 'ls.