Genes in annotation not recorded in $Parameters

bartongroup / RATS

Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.

MIT License

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Genes in annotation not recorded in $Parameters #38

Closed fruce-ki closed 6 years ago

fruce-ki commented 6 years ago

The number of genes present in the annotation was reported as 0. Discovered as a side-point while discussing issue #37 .

fruce-ki commented 6 years ago

Unable to recreate the error using part of user's annotation and stepping through the code.

fruce-ki commented 6 years ago

Also unable to re-create the error using a different annotation in a full run of RATs.

HELP NEEDED: If anyone encounters this issue please get back to me. Until then I am considering it some type of user error.

fruce-ki commented 6 years ago

A normal run of mine did just now report 0 genes in the annotation (blatantly wrong value). Therefore I now have data and parameters with which to determine where the error occurs.