optional dependencies not optional

bartongroup / RATS

Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.

MIT License

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optional dependencies not optional #54

Closed fruce-ki closed 6 years ago

fruce-ki commented 6 years ago

shiny, wasabi and ggplot2 are intended to be optional dependencies. However, in practice, R mandates their presence in order to install rats.

fruce-ki commented 6 years ago

This is an issue with how the dependencies were declared.

fruce-ki commented 6 years ago

Should be fixed now. The code in rats has been refactored so as to not import the namespaces of shiny, wasabi, rhdf5 and ggplot2, and they are now listed as "suggested" packages.