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basf / metis-backend

Scientific server implementation for the cloud environment
BSD 3-Clause "New" or "Revised" License
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Fix container image build #20

Closed knopki closed 11 months ago

knopki commented 11 months ago

Current state of docker build:

  × Running setup.py install for xylib-py did not run successfully.
  │ exit code: 1
  ╰─> [29 lines of output]
      running install
      /usr/local/lib/python3.10/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
        warnings.warn(
      running build
      running build_ext
      building '_xylib' extension
      swigging xylib.i to xylib_wrap.cpp
      swig -python -c++ -modern -modernargs -py3 -o xylib_wrap.cpp xylib.i
      Deprecated command line option: -modern. This option is now always on.
      Deprecated command line option: -modernargs. This option is now always on.
      xylib/xylib.h:211: Warning 362: operator= ignored
      xylib/xylib.h:214: Warning 389: operator[] ignored (consider using %extend)
      xylib/xylib.h:71: Warning 451: Setting a const char * variable may leak memory.
      xylib/xylib.h:72: Warning 451: Setting a const char * variable may leak memory.
      xylib/xylib.h:73: Warning 451: Setting a const char * variable may leak memory.
      xylib/xylib.h:76: Warning 451: Setting a const char * variable may leak memory.
      creating build
      creating build/temp.linux-x86_64-cpython-310
      creating build/temp.linux-x86_64-cpython-310/xylib
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I. -I/usr/local/include/python3.10 -c xylib_wrap.cpp -o build/temp.linux-x86_64-cpython-310/xylib_wrap.o
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I. -I/usr/local/include/python3.10 -c xylib/bruker_raw.cpp -o build/temp.linux-x86_64-cpython-310/xylib/bruker_raw.o
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I. -I/usr/local/include/python3.10 -c xylib/bruker_spc.cpp -o build/temp.linux-x86_64-cpython-310/xylib/bruker_spc.o
      gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -I. -I/usr/local/include/python3.10 -c xylib/cache.cpp -o build/temp.linux-x86_64-cpython-310/xylib/cache.o
      In file included from xylib/cache.cpp:5:
      xylib/cache.h:28:10: fatal error: boost/shared_ptr.hpp: No such file or directory
         28 | #include <boost/shared_ptr.hpp>
            |          ^~~~~~~~~~~~~~~~~~~~~~
      compilation terminated.
      error: command '/usr/bin/gcc' failed with exit code 1
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
error: legacy-install-failure

Installation of libboost-dev package fixes that.