Open alinzh opened 11 months ago
I tried to run metis in Ubuntu. I received an error when trying to add data to 'My data' after a request to the Materials Project.
Output from CLI:
2023-12-13 22:17:24,919 [WARNING] 'int' object has no attribute 'strip' 2023-12-13 22:17:24,936 [INFO] Traceback (most recent call last): 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/base/server.py", line 764, in on_read 2023-12-13 22:17:24,937 [INFO] if data: self.on_data(connection, data) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/servers/http.py", line 755, in on_data 2023-12-13 22:17:24,937 [INFO] connection.parse(data) 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/servers/http2.py", line 119, in parse 2023-12-13 22:17:24,937 [INFO] return self.parser.parse(data) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/common/http.py", line 512, in parse 2023-12-13 22:17:24,937 [INFO] count = method(data) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/common/http.py", line 753, in _parse_message 2023-12-13 22:17:24,937 [INFO] else: return self._parse_normal(data) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/common/http.py", line 781, in _parse_normal 2023-12-13 22:17:24,937 [INFO] self.trigger("on_data") 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/base/observer.py", line 81, in trigger 2023-12-13 22:17:24,937 [INFO] method(*args, **kwargs) 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/servers/http.py", line 494, in on_data 2023-12-13 22:17:24,937 [INFO] self.owner.on_data_http(self.connection_ctx, self.parser_ctx) 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/servers/wsgi.py", line 176, in on_data_http 2023-12-13 22:17:24,937 [INFO] self.on_environ(connection, environ) 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/netius/servers/wsgi.py", line 189, in on_environ 2023-12-13 22:17:24,937 [INFO] sequence = self.app(environ, start_response) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/flask/app.py", line 1478, in __call__ 2023-12-13 22:17:24,937 [INFO] return self.wsgi_app(environ, start_response) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/flask/app.py", line 1458, in wsgi_app 2023-12-13 22:17:24,937 [INFO] response = self.handle_exception(e) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/flask/app.py", line 1455, in wsgi_app 2023-12-13 22:17:24,937 [INFO] response = self.full_dispatch_request() 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/flask/app.py", line 869, in full_dispatch_request 2023-12-13 22:17:24,937 [INFO] rv = self.handle_user_exception(e) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/flask/app.py", line 867, in full_dispatch_request 2023-12-13 22:17:24,937 [INFO] rv = self.dispatch_request() 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/flask/app.py", line 852, in dispatch_request 2023-12-13 22:17:24,937 [INFO] return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/PycharmProjects/metis_first_not_bild/metis-backend/metis_backend/helpers.py", line 46, in decorated 2023-12-13 22:17:24,937 [INFO] return f(*args, **kwargs) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/PycharmProjects/metis_first_not_bild/metis-backend/metis_backend/datasources/bp_data.py", line 50, in create 2023-12-13 22:17:24,937 [INFO] content = request.values.get("content") 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/utils.py", line 106, in __get__ 2023-12-13 22:17:24,937 [INFO] value = self.fget(obj) # type: ignore 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/wrappers/request.py", line 463, in values 2023-12-13 22:17:24,937 [INFO] sources.append(self.form) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/utils.py", line 106, in __get__ 2023-12-13 22:17:24,937 [INFO] value = self.fget(obj) # type: ignore 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/wrappers/request.py", line 443, in form 2023-12-13 22:17:24,937 [INFO] self._load_form_data() 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/flask/wrappers.py", line 114, in _load_form_data 2023-12-13 22:17:24,937 [INFO] super()._load_form_data() 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/wrappers/request.py", line 268, in _load_form_data 2023-12-13 22:17:24,937 [INFO] self._get_stream_for_parsing(), 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/wrappers/request.py", line 295, in _get_stream_for_parsing 2023-12-13 22:17:24,937 [INFO] return self.stream 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/utils.py", line 106, in __get__ 2023-12-13 22:17:24,937 [INFO] value = self.fget(obj) # type: ignore 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/wrappers/request.py", line 347, in stream 2023-12-13 22:17:24,937 [INFO] return get_input_stream( 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/wsgi.py", line 169, in get_input_stream 2023-12-13 22:17:24,937 [INFO] content_length = get_content_length(environ) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/wsgi.py", line 123, in get_content_length 2023-12-13 22:17:24,937 [INFO] return _sansio_utils.get_content_length( 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/sansio/utils.py", line 157, in get_content_length 2023-12-13 22:17:24,937 [INFO] return max(0, _plain_int(http_content_length)) 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] File "/home/alina/miniconda3/lib/python3.11/site-packages/werkzeug/_internal.py", line 210, in _plain_int 2023-12-13 22:17:24,937 [INFO] value = value.strip() 2023-12-13 22:17:24,937 [INFO] ^^^^^^^^^^^ 2023-12-13 22:17:24,937 [INFO] AttributeError: 'int' object has no attribute 'strip' 2023-12-13 22:17:24,937 [INFO] { 2023-12-13 22:17:24,937 [INFO] "_lid" : 4313, 2023-12-13 22:17:24,937 [INFO] "connections" : 1, 2023-12-13 22:17:24,937 [INFO] "encoding_s" : "plain", 2023-12-13 22:17:24,937 [INFO] "has_all_h2" : false, 2023-12-13 22:17:24,937 [INFO] "has_h2" : false, 2023-12-13 22:17:24,937 [INFO] "host" : "localhost", 2023-12-13 22:17:24,937 [INFO] "legacy" : true, 2023-12-13 22:17:24,937 [INFO] "loaded" : true, 2023-12-13 22:17:24,937 [INFO] "name" : "WSGIServer", 2023-12-13 22:17:24,937 [INFO] "poll" : "epoll", 2023-12-13 22:17:24,937 [INFO] "port" : 7050, 2023-12-13 22:17:24,937 [INFO] "safe" : false, 2023-12-13 22:17:24,937 [INFO] "ssl" : false, 2023-12-13 22:17:24,937 [INFO] "state" : "read", 2023-12-13 22:17:24,937 [INFO] "type" : 1 2023-12-13 22:17:24,937 [INFO] }
When running on MacOS (of course, with a different config), this particular problem did't arise.
Known problem. As a temporary solution, please, downgrade flask / werkzeug to a previous major version.
flask
werkzeug
I tried to run metis in Ubuntu. I received an error when trying to add data to 'My data' after a request to the Materials Project.
Output from CLI:
When running on MacOS (of course, with a different config), this particular problem did't arise.