bashtage / arch

ARCH models in Python
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[Snyk] Fix for 14 vulnerabilities #698

Closed bashtage closed 6 months ago

bashtage commented 7 months ago

This PR was automatically created by Snyk using the credentials of a real user.


Snyk has created this PR to fix one or more vulnerable packages in the `pip` dependencies of this project.

#### Changes included in this PR - Changes to the following files to upgrade the vulnerable dependencies to a fixed version: - requirements-dev.txt
⚠️ Warning ``` sphinx 5.3.0 has requirement docutils<0.20,>=0.14, but you have docutils 0.20.1. oldest-supported-numpy 2023.10.25 has requirement numpy==1.14.5; python_version == "3.7" and platform_machine not in "arm64|aarch64|loongarch64" and platform_system != "AIX" and platform_python_implementation != "PyPy", but you have numpy 1.21.3. matplotlib 3.5.3 requires pillow, which is not installed. flake8 5.0.4 has requirement importlib-metadata<4.3,>=1.1.0; python_version < "3.8", but you have importlib-metadata 6.7.0. ```
#### Vulnerabilities that will be fixed ##### By pinning: Severity | Priority Score (*) | Issue | Upgrade | Breaking Change | Exploit Maturity :-------------------------:|-------------------------|:-------------------------|:-------------------------|:-------------------------|:------------------------- ![medium severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/m.png "medium severity") | **531/1000**
**Why?** Proof of Concept exploit, Has a fix available, CVSS 4.2 | Remote Code Execution (RCE)
[SNYK-PYTHON-IPYTHON-3318382](https://snyk.io/vuln/SNYK-PYTHON-IPYTHON-3318382) | `ipython:`
`7.34.0 -> 8.10.0`
| No | Proof of Concept ![medium severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/m.png "medium severity") | **444/1000**
**Why?** Has a fix available, CVSS 4.6 | Access Control Bypass
[SNYK-PYTHON-JUPYTERSERVER-5862881](https://snyk.io/vuln/SNYK-PYTHON-JUPYTERSERVER-5862881) | `jupyter-server:`
`1.24.0 -> 2.7.2`
| No | No Known Exploit ![medium severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/m.png "medium severity") | **429/1000**
**Why?** Has a fix available, CVSS 4.3 | Open Redirect
[SNYK-PYTHON-JUPYTERSERVER-5862882](https://snyk.io/vuln/SNYK-PYTHON-JUPYTERSERVER-5862882) | `jupyter-server:`
`1.24.0 -> 2.7.2`
| No | No Known Exploit ![low severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/l.png "low severity") | **506/1000**
**Why?** Proof of Concept exploit, Has a fix available, CVSS 3.7 | NULL Pointer Dereference
[SNYK-PYTHON-NUMPY-2321964](https://snyk.io/vuln/SNYK-PYTHON-NUMPY-2321964) | `numpy:`
`1.14.5 -> 1.22.2`
| No | Proof of Concept ![low severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/l.png "low severity") | **399/1000**
**Why?** Has a fix available, CVSS 3.7 | Buffer Overflow
[SNYK-PYTHON-NUMPY-2321966](https://snyk.io/vuln/SNYK-PYTHON-NUMPY-2321966) | `numpy:`
`1.14.5 -> 1.22.2`
| No | No Known Exploit ![low severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/l.png "low severity") | **506/1000**
**Why?** Proof of Concept exploit, Has a fix available, CVSS 3.7 | Buffer Overflow
[SNYK-PYTHON-NUMPY-2321969](https://snyk.io/vuln/SNYK-PYTHON-NUMPY-2321969) | `numpy:`
`1.14.5 -> 1.22.2`
| No | Proof of Concept ![low severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/l.png "low severity") | **506/1000**
**Why?** Proof of Concept exploit, Has a fix available, CVSS 3.7 | Denial of Service (DoS)
[SNYK-PYTHON-NUMPY-2321970](https://snyk.io/vuln/SNYK-PYTHON-NUMPY-2321970) | `numpy:`
`1.14.5 -> 1.22.2`
| No | Proof of Concept ![critical severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/c.png "critical severity") | **811/1000**
**Why?** Proof of Concept exploit, Has a fix available, CVSS 9.8 | Arbitrary Code Execution
[SNYK-PYTHON-NUMPY-73513](https://snyk.io/vuln/SNYK-PYTHON-NUMPY-73513) | `numpy:`
`1.14.5 -> 1.22.2`
| No | Proof of Concept ![critical severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/c.png "critical severity") | **909/1000**
**Why?** Mature exploit, Has a fix available, CVSS 9.6 | Heap-based Buffer Overflow
[SNYK-PYTHON-PILLOW-5918878](https://snyk.io/vuln/SNYK-PYTHON-PILLOW-5918878) | `pillow:`
`9.5.0 -> 10.0.1`
| No | Mature ![high severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/h.png "high severity") | **589/1000**
**Why?** Has a fix available, CVSS 7.5 | Uncontrolled Resource Consumption ('Resource Exhaustion')
[SNYK-PYTHON-PILLOW-6043904](https://snyk.io/vuln/SNYK-PYTHON-PILLOW-6043904) | `pillow:`
`9.5.0 -> 10.0.1`
| No | No Known Exploit ![medium severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/m.png "medium severity") | **509/1000**
**Why?** Has a fix available, CVSS 5.9 | Regular Expression Denial of Service (ReDoS)
[SNYK-PYTHON-SETUPTOOLS-3180412](https://snyk.io/vuln/SNYK-PYTHON-SETUPTOOLS-3180412) | `setuptools:`
`39.0.1 -> 65.5.1`
| No | No Known Exploit ![low severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/l.png "low severity") | **384/1000**
**Why?** Has a fix available, CVSS 3.4 | Open Redirect
[SNYK-PYTHON-TORNADO-5537286](https://snyk.io/vuln/SNYK-PYTHON-TORNADO-5537286) | `tornado:`
`6.2 -> 6.3.3`
| No | No Known Exploit ![medium severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/m.png "medium severity") | **494/1000**
**Why?** Has a fix available, CVSS 5.6 | HTTP Request Smuggling
[SNYK-PYTHON-TORNADO-5840803](https://snyk.io/vuln/SNYK-PYTHON-TORNADO-5840803) | `tornado:`
`6.2 -> 6.3.3`
| No | No Known Exploit ![medium severity](https://res.cloudinary.com/snyk/image/upload/w_20,h_20/v1561977819/icon/m.png "medium severity") | **539/1000**
**Why?** Has a fix available, CVSS 6.5 | HTTP Request Smuggling
[SNYK-PYTHON-TORNADO-6041512](https://snyk.io/vuln/SNYK-PYTHON-TORNADO-6041512) | `tornado:`
`6.2 -> 6.3.3`
| No | No Known Exploit (*) Note that the real score may have changed since the PR was raised. Some vulnerabilities couldn't be fully fixed and so Snyk will still find them when the project is tested again. This may be because the vulnerability existed within more than one direct dependency, but not all of the affected dependencies could be upgraded. Check the changes in this PR to ensure they won't cause issues with your project. ------------ **Note:** *You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs.* For more information: 🧐 [View latest project report](https://app.snyk.io/org/bashtage/project/48bc380b-7493-4cde-b60f-5a3cb1fa4daf?utm_source=github&utm_medium=referral&page=fix-pr) 🛠 [Adjust project settings](https://app.snyk.io/org/bashtage/project/48bc380b-7493-4cde-b60f-5a3cb1fa4daf?utm_source=github&utm_medium=referral&page=fix-pr/settings) 📚 [Read more about Snyk's upgrade and patch logic](https://support.snyk.io/hc/en-us/articles/360003891078-Snyk-patches-to-fix-vulnerabilities) [//]: # (snyk:metadata:{"prId":"a69f6197-0f40-4119-997a-ade7db2d77f9","prPublicId":"a69f6197-0f40-4119-997a-ade7db2d77f9","dependencies":[{"name":"ipython","from":"7.34.0","to":"8.10.0"},{"name":"jupyter-server","from":"1.24.0","to":"2.7.2"},{"name":"numpy","from":"1.14.5","to":"1.22.2"},{"name":"pillow","from":"9.5.0","to":"10.0.1"},{"name":"setuptools","from":"39.0.1","to":"65.5.1"},{"name":"tornado","from":"6.2","to":"6.3.3"}],"packageManager":"pip","projectPublicId":"48bc380b-7493-4cde-b60f-5a3cb1fa4daf","projectUrl":"https://app.snyk.io/org/bashtage/project/48bc380b-7493-4cde-b60f-5a3cb1fa4daf?utm_source=github&utm_medium=referral&page=fix-pr","type":"auto","patch":[],"vulns":["SNYK-PYTHON-IPYTHON-3318382","SNYK-PYTHON-JUPYTERSERVER-5862881","SNYK-PYTHON-JUPYTERSERVER-5862882","SNYK-PYTHON-NUMPY-73513","SNYK-PYTHON-NUMPY-2321964","SNYK-PYTHON-NUMPY-2321966","SNYK-PYTHON-NUMPY-2321969","SNYK-PYTHON-NUMPY-2321970","SNYK-PYTHON-PILLOW-5918878","SNYK-PYTHON-PILLOW-6043904","SNYK-PYTHON-SETUPTOOLS-3180412","SNYK-PYTHON-TORNADO-5537286","SNYK-PYTHON-TORNADO-5840803","SNYK-PYTHON-TORNADO-6041512"],"upgrade":[],"isBreakingChange":false,"env":"prod","prType":"fix","templateVariants":["pr-warning-shown","priorityScore"],"priorityScoreList":[531,444,429,811,506,399,506,506,909,589,509,384,494,539],"remediationStrategy":"vuln"}) --- **Learn how to fix vulnerabilities with free interactive lessons:** 🦉 [Remote Code Execution (RCE)](https://learn.snyk.io/lesson/improper-input-validation/?loc=fix-pr) 🦉 [Access Control Bypass](https://learn.snyk.io/lesson/broken-access-control/?loc=fix-pr) 🦉 [Open Redirect](https://learn.snyk.io/lesson/open-redirect/?loc=fix-pr) 🦉 [More lessons are available in Snyk Learn](https://learn.snyk.io/?loc=fix-pr)
codecov[bot] commented 7 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Comparison is base (f2577b5) 99.52% compared to head (1111867) 99.52%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #698 +/- ## ======================================= Coverage 99.52% 99.52% ======================================= Files 74 74 Lines 15487 15487 Branches 2084 2084 ======================================= Hits 15413 15413 Misses 50 50 Partials 24 24 ```

:umbrella: View full report in Codecov by Sentry.
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