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bast / MRI-extract-surfaces

Set of containerized scripts to extract mesh surfaces from a T1/T2-weighted MRI scans.
European Union Public License 1.2
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Input data does not have to be gzipped #2

Closed bast closed 6 months ago

bast commented 7 months ago

This works:

$ ./extract-surfaces.sif T1_ernie.nii.gz ernie_data

But this should also work but needs to adapt the container definition:

$ ./extract-surfaces.sif T1_ernie.nii ernie_data